RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 CD9P21926 228 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 NMBRP28336 390 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 PKLRP30613 574 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 KCNJ1P48048 391 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 LMAN1P49257 510 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 RAB28P51157 221 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 ITGA1P56199 1179 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 RPS18P62269 152 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 PRAMEP78395 509 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 CRADDP78560 199 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 FOXK1P85037 733 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 TLE1Q04724 770 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 HSPA14Q0VDF9 509 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 KCNJ11Q14654 390 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 BRD3Q15059 726 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 CYP1B1Q16678 543 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 TYSND1Q2T9J0 566 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 LACTB2Q53H82 288 aaPredicted RBP9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 RHBDD2Q6NTF9 364 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 CLEC18BQ6UXF7 455 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 LDB1Q86U70 411 aaPredicted RBP9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 RASGEF1CQ8N431 466 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 C19orf47Q8N9M1 422 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 LINC01555Q8NAE3 123 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 CLEC18CQ8NCF0 446 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 PPHLN1Q8NEY8 458 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 HMGCLL1Q8TB92 370 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 ZNF285Q96NJ3 590 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 BIRC8Q96P09 236 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 TCF12Q99081 682 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 DHRS4Q9BTZ2 278 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 TRIM55Q9BYV6 548 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 EPN3Q9H201 632 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 ACTR5Q9H9F9 607 aaPredicted RBP9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 FANCEQ9HB96 536 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 CATSPERZQ9NTU4 200 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 BFARQ9NZS9 450 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 TP53TG5Q9Y2B4 290 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 PCDHGA9Q9Y5G4 932 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 KLK4Q9Y5K2 254 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 MAST4O15021 2626 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 SNRNP200O75643 2136 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 FER1L5A0AVI2 2057 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 HECTD1Q9ULT8 2610 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 ANKRD12Q6UB98 2062 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 A0A0J9YY10 115 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 E7EQ34 232 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 KPNA5O15131 536 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 FKBP9O95302 570 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 PDGFAP04085 211 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 APOA4P06727 396 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 CTSBP07858 339 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 HBQ1P09105 142 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 CXCR5P32302 372 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 CD97P48960 835 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 SESN2P58004 480 aaPredicted RBP9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 KLRB1Q12918 225 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 NCF4Q15080 339 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 TTC27Q6P3X3 843 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 TRIM73Q86UV7 250 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 CAND1Q86VP6 1230 aaKnown RBP9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 DCUN1D3Q8IWE4 304 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 SYTL1Q8IYJ3 562 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 ENDOVQ8N8Q3 282 aaKnown RBP9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 MCUQ8NE86 351 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 OR2L8Q8NGY9 312 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 LPGAT1Q92604 370 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 MFSD3Q96ES6 412 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 GBP5Q96PP8 586 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 TSSK1BQ9BXA7 367 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 TRIM4Q9C037 500 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 SPRTNQ9H040 489 aaPredicted RBP9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 KLHL25Q9H0H3 589 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 SOX13Q9UN79 622 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 MAN2B2Q9Y2E5 1009 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 PPP2R2CQ9Y2T4 447 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 LRRK2Q5S007 2527 aa9.37□□□□□ -0.91
TMEM39A-207ENST00000482162 CEP104O60308 925 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 KDM1AO60341 852 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 DNAJB5O75953 348 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 OR2B3O76000 313 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 VAPBO95292 243 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 MATN4O95460 622 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 C1orf105O95561 183 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 S1PR4O95977 384 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 RPN2P04844 631 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 MLNP12872 115 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 CYP2A7P20853 494 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 MGAT1P26572 445 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 ATP5DP30049 168 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 MAGEA3P43357 314 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 PTCHD3Q3KNS1 767 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 SYTL3Q4VX76 610 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 CTSL3PQ5NE16 218 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 KIAA0930Q6ICG6 404 aaPredicted RBP9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 MRPL14Q6P1L8 145 aaKnown RBP9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 TLDC1Q6P9B6 456 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 ASB18Q6ZVZ8 466 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 GPR135Q8IZ08 494 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 KRT222Q8N1A0 295 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms