RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	RSRC2	Q7L4I2	434 aa	Known RBP	2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	CEP57L1	Q8IYX8	460 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	ADGRF2	Q8IZF7	708 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	CDK20	Q8IZL9	346 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173		Q8N377	158 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	PPFIBP2	Q8ND30	876 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	VANGL1	Q8TAA9	524 aa	Predicted RBP	2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	ZNF519	Q8TB69	540 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	SMAP2	Q8WU79	429 aa	Predicted RBP	2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	PHLDA1	Q8WV24	401 aa	Predicted RBP	2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	SLCO2A1	Q92959	643 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	SAT2	Q96F10	170 aa	Predicted RBP	2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	ZNF486	Q96H40	463 aa	Predicted RBP	2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	NECTIN4	Q96NY8	510 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	USP28	Q96RU2	1077 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	SOST	Q9BQB4	213 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	URM1	Q9BTM9	101 aa	Known RBP	2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	KCNK15	Q9H427	330 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	DAPK2	Q9UIK4	370 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	PLAGL1	Q9UM63	463 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173	PPP2R2C	Q9Y2T4	447 aa		2.7	□□□□□ -1.98
CCNL1-223	ENST00000481173		A0A087X0M5	115 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173		A0A1B0GX30	115 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	LNP1	A1A4G5	178 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	CDRT15L2	A8MXV6	281 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	KPNA7	A9QM74	516 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	DDHD2	O94830	711 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	SCGB1D1	O95968	90 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	IGHV4-31	P0DP07	118 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	CYP2A7	P20853	494 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	SLC6A6	P31641	620 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	CCR10	P46092	362 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	RPL21	P46778	160 aa	Known RBP	2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	HERV-K104	P61576	105 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	GCNT1	Q02742	428 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	ELAVL2	Q12926	359 aa	Known RBP	2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	RIG	Q13278	110 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	NFATC2	Q13469	925 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	C20orf194	Q5TEA3	1177 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	TMCO3	Q6UWJ1	677 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	HAUS6	Q7Z4H7	955 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	C11orf53	Q8IXP5	236 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	FBXO39	Q8N4B4	442 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	LINC00612	Q8N6U2	182 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	OR11H4	Q8NGC9	324 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	GTF3A	Q92664	365 aa	Known RBP	2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	NSMCE3	Q96MG7	304 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	FOXN4	Q96NZ1	517 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	BTBD10	Q9BSF8	475 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	LMF2	Q9BU23	707 aa	Known RBP	2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	SHARPIN	Q9H0F6	387 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	TBC1D17	Q9HA65	648 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	FGF21	Q9NSA1	209 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	P4HTM	Q9NXG6	502 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	ARHGEF38	Q9NXL2	777 aa		2.69	□□□□□ -1.98
CCNL1-223	ENST00000481173	ATRX	P46100	2492 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	EPM2A	B3EWF7	344 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	EPB41L2	O43491	1005 aa	Known RBP	2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	IDH3B	O43837	385 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	PTP4A3	O75365	173 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	WDPCP	O95876	746 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	PRKACG	P22612	351 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	RBMS1	P29558	406 aa	Known RBP	2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	CDK3	Q00526	305 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	SPDYC	Q5MJ68	293 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	GORAB	Q5T7V8	394 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	TMEM207	Q6UWW9	146 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	TMPRSS11F	Q6ZWK6	438 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	ERC1	Q8IUD2	1116 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	AFAP1	Q8N556	730 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	NPEPL1	Q8NDH3	523 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	OR10G8	Q8NGN5	311 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	MOSPD2	Q8NHP6	518 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	HDAC2	Q92769	488 aa	Known RBP	2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	CDRT15	Q96T59	188 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	KRT12	Q99456	494 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	OLFM1	Q99784	485 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	PITPNM3	Q9BZ71	974 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	OR2B2	Q9GZK3	357 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	SPATC1L	Q9H0A9	340 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	SEC63	Q9UGP8	760 aa	Known RBP	2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	MUTYH	Q9UIF7	546 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	TNN	Q9UQP3	1299 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	CROCC	Q5TZA2	2017 aa		2.68	□□□□□ -1.98
CCNL1-223	ENST00000481173	ANKUB1	A6NFN9	424 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	C15orf61	A6NNL5	157 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	AP3D1	O14617	1153 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	PAPSS1	O43252	624 aa	Predicted RBP	2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	OR10H2	O60403	315 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	RNASEH1	O60930	286 aa	Known RBP	2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	AVIL	O75366	819 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	MED24	O75448	989 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	HSPA8	P11142	646 aa	Known RBP	2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	LHCGR	P22888	699 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	JAK1	P23458	1154 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	HUNK	P57058	714 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	CXCL9	Q07325	125 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	PEX6	Q13608	980 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	HERC3	Q15034	1050 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	IGSF11	Q5DX21	431 aa		2.67	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms