RNA–Protein interactions for RNA: ENST00000479584.1

CDK5RAP2-211, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 3

Gene CDK5RAP2, Length 611 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-211	ENST00000479584	SNX7	Q9UNH6	387 aa		11.91	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	VPS9D1	Q9Y2B5	631 aa		11.91	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	IQCF5	A8MTL0	148 aa		11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	ZSCAN12	O43309	604 aa		11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	ZNF749	O43361	778 aa		11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	GPC4	O75487	556 aa		11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	SLCO2B1	O94956	709 aa		11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	KRT14	P02533	472 aa		11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	NMBR	P28336	390 aa		11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	VPS41	P49754	854 aa		11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	TERF1	P54274	439 aa		11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	PMS2	P54278	862 aa		11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	EIF3B	P55884	814 aa	Known RBP	11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	SEMA3A	Q14563	771 aa		11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	TRIP13	Q15645	432 aa	Predicted RBP	11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	SLC5A12	Q1EHB4	618 aa		11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	CDHR3	Q6ZTQ4	885 aa		11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	SYTL1	Q8IYJ3	562 aa		11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	PRELID2	Q8N945	189 aa		11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	TEX19	Q8NA77	164 aa		11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	SLC38A9	Q8NBW4	561 aa		11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	DENND1A	Q8TEH3	1009 aa		11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	RAB11FIP5	Q9BXF6	653 aa		11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	GRPEL1	Q9HAV7	217 aa		11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	MARCH4	Q9P2E8	410 aa	Predicted RBP	11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	GPN3	Q9UHW5	284 aa	Predicted RBP	11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	PLAGL1	Q9UM63	463 aa		11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	PADI2	Q9Y2J8	665 aa		11.9	□□□□□ -0.5
CDK5RAP2-211	ENST00000479584	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	GOLGA6L10	A0A0M3HER8	536 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	SDR42E2	A6NKP2	422 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	S1PR4	O95977	384 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	FURIN	P09958	794 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	CD9	P21926	228 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	RPS3	P23396	243 aa	Known RBP eCLIP	11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	FMO4	P31512	558 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	CCNF	P41002	786 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	KLRB1	Q12918	225 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	SF1	Q15637	639 aa	Known RBP	11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	KYNU	Q16719	465 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	PRAMEF17	Q5VTA0	474 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	TCTN3	Q6NUS6	607 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	TLDC1	Q6P9B6	456 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	ZNF517	Q6ZMY9	492 aa	Predicted RBP	11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	ASB18	Q6ZVZ8	466 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	TRIM73	Q86UV7	250 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	APLF	Q8IW19	511 aa	Predicted RBP	11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	KRT222	Q8N1A0	295 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	ENDOV	Q8N8Q3	282 aa	Known RBP	11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	GRK7	Q8WTQ7	553 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	RAD51AP1	Q96B01	352 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	NRTN	Q99748	197 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	NDC1	Q9BTX1	674 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	DHRS4	Q9BTZ2	278 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	XAB2	Q9HCS7	855 aa	Known RBP	11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	ACSS2	Q9NR19	701 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	TXLNG	Q9NUQ3	528 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	PCMTD2	Q9NV79	361 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	SYBU	Q9NX95	663 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	SPHK1	Q9NYA1	384 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	SOX13	Q9UN79	622 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	SRPK3	Q9UPE1	567 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	PLCL2	Q9UPR0	1127 aa		11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	ZNF106	Q9H2Y7	1883 aa	Known RBP	11.89	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584		E5RI56	91 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	PGRMC1	O00264	195 aa	Known RBP	11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	KIF5C	O60282	957 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	FKBP9	O95302	570 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	ZIC2	O95409	532 aa	Predicted RBP	11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	ESR1	P03372	595 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	MLN	P12872	115 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	CHRM3	P20309	590 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	PKLR	P30613	574 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	RORA	P35398	523 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	CASR	P41180	1078 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	MAGEA6	P43360	314 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	RPS18	P62269	152 aa	Known RBP	11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	TLE1	Q04724	770 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	THOC5	Q13769	683 aa	Known RBP	11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	ZC3H12B	Q5HYM0	836 aa	Known RBP	11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	NEPRO	Q6NW34	567 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	CCDC137	Q6PK04	289 aa	Known RBP	11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	CES3	Q6UWW8	571 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	TMEM135	Q86UB9	458 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	VRK3	Q8IV63	474 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	RASGEF1C	Q8N431	466 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	OR2L8	Q8NGY9	312 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	PROKR1	Q8TCW9	393 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	ANP32B	Q92688	251 aa	Known RBP	11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	DLG3	Q92796	817 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	MFSD3	Q96ES6	412 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	TRIM4	Q9C037	500 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	P2RY12	Q9H244	342 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	FAM60A	Q9NP50	221 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	TLK1	Q9UKI8	766 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	TCFL5	Q9UL49	500 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	CDYL	Q9Y232	598 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	TP53TG5	Q9Y2B4	290 aa		11.88	□□□□□ -0.51
CDK5RAP2-211	ENST00000479584	TCRBV7S3A2	A0A539	114 aa		11.87	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms