RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 SERPINB9P50453 376 aa15.39■□□□□ 0.05
COPS3-207ENST00000477299 EPHA4P54764 986 aa15.39■□□□□ 0.05
COPS3-207ENST00000477299 FOXC1Q12948 553 aa15.39■□□□□ 0.05
COPS3-207ENST00000477299 SQSTM1Q13501 440 aa15.39■□□□□ 0.05
COPS3-207ENST00000477299 SPIDRQ14159 915 aa15.39■□□□□ 0.05
COPS3-207ENST00000477299 OR4D1Q15615 310 aa15.39■□□□□ 0.05
COPS3-207ENST00000477299 TSNQ15631 228 aaKnown RBP15.39■□□□□ 0.05
COPS3-207ENST00000477299 SBSNQ6UWP8 590 aa15.39■□□□□ 0.05
COPS3-207ENST00000477299 FAM92BQ6ZTR7 304 aa15.39■□□□□ 0.05
COPS3-207ENST00000477299 AMIGO1Q86WK6 493 aa15.39■□□□□ 0.05
COPS3-207ENST00000477299 DCUN1D3Q8IWE4 304 aa15.39■□□□□ 0.05
COPS3-207ENST00000477299 NKAPQ8N5F7 415 aaKnown RBP15.39■□□□□ 0.05
COPS3-207ENST00000477299 AVL9Q8NBF6 648 aa15.39■□□□□ 0.05
COPS3-207ENST00000477299 RCBTB1Q8NDN9 531 aa15.39■□□□□ 0.05
COPS3-207ENST00000477299 AHCYL2Q96HN2 611 aaKnown RBP15.39■□□□□ 0.05
COPS3-207ENST00000477299 FOPNLQ96NB1 174 aa15.39■□□□□ 0.05
COPS3-207ENST00000477299 VPS11Q9H270 941 aa15.39■□□□□ 0.05
COPS3-207ENST00000477299 SRMSQ9H3Y6 488 aa15.39■□□□□ 0.05
COPS3-207ENST00000477299 SYTL2Q9HCH5 934 aa15.39■□□□□ 0.05
COPS3-207ENST00000477299 UTP6Q9NYH9 597 aaKnown RBP15.39■□□□□ 0.05
COPS3-207ENST00000477299 POLG2Q9UHN1 485 aa15.39■□□□□ 0.05
COPS3-207ENST00000477299 IGHV5-10-1A0A0J9YXX1 117 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 A0A1W2PNU3 283 aaPredicted RBP15.38■□□□□ 0.05
COPS3-207ENST00000477299 OR5K3A6NET4 321 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 GOLGA8RI6L899 631 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 CAPN5O15484 640 aaPredicted RBP15.38■□□□□ 0.05
COPS3-207ENST00000477299 PRAMEF10O60809 474 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 KRT38O76015 456 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 TUBBP07437 444 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 CRABP2P29373 138 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 CAPZBP47756 277 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 GLRBP48167 497 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 SERPINB8P50452 374 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 KPNA2P52292 529 aaKnown RBP15.38■□□□□ 0.05
COPS3-207ENST00000477299 GPLD1P80108 840 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 C18orf21Q32NC0 220 aaPredicted RBP15.38■□□□□ 0.05
COPS3-207ENST00000477299 MAP9Q49MG5 647 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 IRGCQ6NXR0 463 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 TRIM73Q86UV7 250 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 SLITRK4Q8IW52 837 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 IQCKQ8N0W5 287 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 OR9A1PQ8NGU1 263 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 FLVCR1-AS1Q8TAF5 88 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 ISL2Q96A47 359 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 RAD51AP1Q96B01 352 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 GPR78Q96P69 363 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 TGM7Q96PF1 710 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 CCDC77Q9BR77 488 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 SLC12A9Q9BXP2 914 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 PSMC3IPQ9P2W1 217 aaPredicted RBP15.38■□□□□ 0.05
COPS3-207ENST00000477299 FETUBQ9UGM5 382 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 KLK13Q9UKR3 277 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 WASF3Q9UPY6 502 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 ACOT9Q9Y305 439 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 ENTPD2Q9Y5L3 495 aa15.38■□□□□ 0.05
COPS3-207ENST00000477299 A0A1W2PPV9 198 aa15.37■□□□□ 0.05
COPS3-207ENST00000477299 CCDC151A5D8V7 595 aa15.37■□□□□ 0.05
COPS3-207ENST00000477299 MYO1CO00159 1063 aa15.37■□□□□ 0.05
COPS3-207ENST00000477299 RASGRF2O14827 1237 aa15.37■□□□□ 0.05
COPS3-207ENST00000477299 DUX1O43812 170 aa15.37■□□□□ 0.05
COPS3-207ENST00000477299 CSO75390 466 aaKnown RBP15.37■□□□□ 0.05
COPS3-207ENST00000477299 SLC16A8O95907 504 aa15.37■□□□□ 0.05
COPS3-207ENST00000477299 CATP04040 527 aaKnown RBP15.37■□□□□ 0.05
COPS3-207ENST00000477299 CHRM5P08912 532 aaPredicted RBP15.37■□□□□ 0.05
COPS3-207ENST00000477299 PSMB5P28074 263 aa15.37■□□□□ 0.05
COPS3-207ENST00000477299 TARDBPQ13148 414 aaKnown RBP eCLIP15.37■□□□□ 0.05
COPS3-207ENST00000477299 PPP1R3AQ16821 1122 aa15.37■□□□□ 0.05
COPS3-207ENST00000477299 FBXO48Q5FWF7 155 aa15.37■□□□□ 0.05
COPS3-207ENST00000477299 TMEM71Q6P5X7 295 aa15.37■□□□□ 0.05
COPS3-207ENST00000477299 SUSD1Q6UWL2 747 aa15.37■□□□□ 0.05
COPS3-207ENST00000477299 RBM44Q6ZP01 1051 aaKnown RBP15.37■□□□□ 0.05
COPS3-207ENST00000477299 ISCA2Q86U28 154 aa15.37■□□□□ 0.05
COPS3-207ENST00000477299 LRRC56Q8IYG6 542 aaPredicted RBP15.37■□□□□ 0.05
COPS3-207ENST00000477299 ZNF480Q8WV37 535 aa15.37■□□□□ 0.05
COPS3-207ENST00000477299 CCDC74BQ96LY2 380 aa15.37■□□□□ 0.05
COPS3-207ENST00000477299 MAP3K3Q99759 626 aa15.37■□□□□ 0.05
COPS3-207ENST00000477299 DERL2Q9GZP9 239 aa15.37■□□□□ 0.05
COPS3-207ENST00000477299 TWSG1Q9GZX9 223 aa15.37■□□□□ 0.05
COPS3-207ENST00000477299 KLHL25Q9H0H3 589 aa15.37■□□□□ 0.05
COPS3-207ENST00000477299 PARVBQ9HBI1 364 aa15.37■□□□□ 0.05
COPS3-207ENST00000477299 CLCA2Q9UQC9 943 aa15.37■□□□□ 0.05
COPS3-207ENST00000477299 KLHL20Q9Y2M5 609 aa15.37■□□□□ 0.05
COPS3-207ENST00000477299 MDC1Q14676 2089 aaKnown RBP15.37■□□□□ 0.05
COPS3-207ENST00000477299 GSAPA4D1B5 854 aa15.36■□□□□ 0.05
COPS3-207ENST00000477299 PRICKLE3O43900 615 aaPredicted RBP15.36■□□□□ 0.05
COPS3-207ENST00000477299 TCEA3O75764 348 aa15.36■□□□□ 0.05
COPS3-207ENST00000477299 KRT37O76014 449 aa15.36■□□□□ 0.05
COPS3-207ENST00000477299 GUCA1CO95843 209 aa15.36■□□□□ 0.05
COPS3-207ENST00000477299 C9P02748 559 aa15.36■□□□□ 0.05
COPS3-207ENST00000477299 RPN2P04844 631 aa15.36■□□□□ 0.05
COPS3-207ENST00000477299 C8GP07360 202 aa15.36■□□□□ 0.05
COPS3-207ENST00000477299 JUPP14923 745 aa15.36■□□□□ 0.05
COPS3-207ENST00000477299 PVRP15151 417 aa15.36■□□□□ 0.05
COPS3-207ENST00000477299 TFEBP19484 476 aa15.36■□□□□ 0.05
COPS3-207ENST00000477299 IMPA1P29218 277 aa15.36■□□□□ 0.05
COPS3-207ENST00000477299 CCNFP41002 786 aa15.36■□□□□ 0.05
COPS3-207ENST00000477299 SEPHS1P49903 392 aa15.36■□□□□ 0.05
COPS3-207ENST00000477299 RAB28P51157 221 aa15.36■□□□□ 0.05
COPS3-207ENST00000477299 ZFP36L1Q07352 338 aaKnown RBP15.36■□□□□ 0.05
COPS3-207ENST00000477299 ZNF844Q08AG5 666 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms