RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 COX16Q9P0S2 106 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 KCNN3Q9UGI6 736 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 ING1Q9UK53 422 aaPredicted RBP4.05□□□□□ -1.76
VPS13D-207ENST00000476169 TSPAN16Q9UKR8 245 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 GRIP1Q9Y3R0 1128 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 HBS1LQ9Y450 684 aaKnown RBP4.05□□□□□ -1.76
VPS13D-207ENST00000476169 SNX9Q9Y5X1 595 aa4.05□□□□□ -1.76
VPS13D-207ENST00000476169 DHX29Q7Z478 1369 aaKnown RBP4.04□□□□□ -1.76
VPS13D-207ENST00000476169 A6NNC1 897 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 CCDC169A6NNP5 214 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 PLK4O00444 970 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 BCAR3O75815 825 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 CHRNB1P11230 501 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 MAOAP21397 527 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 MPZP25189 248 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 PIK3R1P27986 724 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 PSMA5P28066 241 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 GDF5P43026 501 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 PPP3CCP48454 512 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 LHX1P48742 406 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 DLK1P80370 383 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 OVGP1Q12889 678 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 SCGB2A2Q13296 93 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 RIPK1Q13546 671 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 GIT2Q14161 759 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 FAM174BQ3ZCQ3 159 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 GLIPR1L2Q4G1C9 344 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 DCAF6Q58WW2 860 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 KCTD11Q693B1 232 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 DUS1LQ6P1R4 473 aaKnown RBP4.04□□□□□ -1.76
VPS13D-207ENST00000476169 SLC36A4Q6YBV0 504 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 SYVN1Q86TM6 617 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 GPR180Q86V85 440 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 GPSM1Q86YR5 675 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 PM20D2Q8IYS1 436 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 RBFAQ8N0V3 343 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 LEMD2Q8NC56 503 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 TMEM185AQ8NFB2 350 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 SLC24A4Q8NFF2 622 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 CHURC1Q8WUH1 139 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 SELENOMQ8WWX9 145 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 ADAMTS14Q8WXS8 1223 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 FAM46BQ96A09 425 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 GRAMD2BQ96HH9 432 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 CFAP53Q96M91 514 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 CRAMP1Q96RY5 1269 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 TPPP3Q9BW30 176 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 CARD9Q9H257 536 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 KLHL31Q9H511 634 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 ESRP2Q9H6T0 727 aaKnown RBP4.04□□□□□ -1.76
VPS13D-207ENST00000476169 ATAD3AQ9NVI7 634 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 MSRB1Q9NZV6 116 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 RHCGQ9UBD6 479 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 UBQLN2Q9UHD9 624 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 ABT1Q9ULW3 272 aaKnown RBP4.04□□□□□ -1.76
VPS13D-207ENST00000476169 GPR132Q9UNW8 380 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 SMARCA2P51531 1590 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 HMGXB3Q12766 1538 aa4.04□□□□□ -1.76
VPS13D-207ENST00000476169 COL11A2P13942 1736 aaPredicted RBP4.04□□□□□ -1.76
VPS13D-207ENST00000476169 ASTN2O75129 1339 aaPredicted RBP4.03□□□□□ -1.76
VPS13D-207ENST00000476169 PEG3Q9GZU2 1588 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 A0A0G2JK05 382 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 A0A1W2PPQ1 181 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 HEPACAM2A8MVW5 462 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 B4DGG1 531 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 H0YGN5 161 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 SGK1O00141 431 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 VWA5AO00534 786 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 E2F3O00716 465 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 PRRG2O14669 202 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 MAGEB2O15479 319 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 FLRT2O43155 660 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 SPINT2O43291 252 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 KLHL41O60662 606 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 PRAMEF12O95522 483 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 NUDT3O95989 172 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 C9P02748 559 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 PCCBP05166 539 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 ANKRD34CP0C6C1 535 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 SAGP10523 405 aaPredicted RBP4.03□□□□□ -1.76
VPS13D-207ENST00000476169 TOP1P11387 765 aaKnown RBP4.03□□□□□ -1.76
VPS13D-207ENST00000476169 ZNF18P17022 549 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 PKLRP30613 574 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 SOX6P35712 828 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 ACVRL1P37023 503 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 ARCN1P48444 511 aaKnown RBP4.03□□□□□ -1.76
VPS13D-207ENST00000476169 ALDH7A1P49419 539 aaKnown RBP4.03□□□□□ -1.76
VPS13D-207ENST00000476169 GMPSP49915 693 aaPredicted RBP4.03□□□□□ -1.76
VPS13D-207ENST00000476169 HNRNPFP52597 415 aaKnown RBP4.03□□□□□ -1.76
VPS13D-207ENST00000476169 MFAP3P55082 362 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 ZXDAP98168 799 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 PMP22Q01453 160 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 COL10A1Q03692 680 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 PRKCZQ05513 592 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 LCP2Q13094 533 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 CUL3Q13618 768 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 PDE7AQ13946 482 aa4.03□□□□□ -1.76
VPS13D-207ENST00000476169 ZKSCAN8Q15776 578 aaPredicted RBP4.03□□□□□ -1.76
VPS13D-207ENST00000476169 CTU2Q2VPK5 515 aaKnown RBP4.03□□□□□ -1.76
VPS13D-207ENST00000476169 RABL6Q3YEC7 729 aaPredicted RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms