RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	TCF7	P36402	384 aa	Predicted RBP	4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	TSPAN7	P41732	249 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	METAP2	P50579	478 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	CLCN4	P51793	760 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	TROAP	Q12815	778 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	HTR4	Q13639	388 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	NONO	Q15233	471 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	MLF2	Q15773	248 aa	Predicted RBP	4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	KRTAP27-1	Q3LI81	207 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	SGO1	Q5FBB7	561 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	CLLU1OS	Q5K130	101 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	FAAH2	Q6GMR7	532 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	C15orf39	Q6ZRI6	1047 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	C1orf122	Q6ZSJ8	110 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	SLC24A5	Q71RS6	500 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	FOXRED2	Q8IWF2	684 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	SLC35F3	Q8IY50	421 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	DSEL	Q8IZU8	1212 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	LRRC43	Q8N309	656 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	MAB21L3	Q8N8X9	362 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	LMNTD1	Q8N9Z9	388 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	KBTBD3	Q8NAB2	608 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	NOC3L	Q8WTT2	800 aa	Known RBP	4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	ZUFSP	Q96AP4	578 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	KIF1BP	Q96EK5	621 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	HES6	Q96HZ4	224 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	FEM1C	Q96JP0	617 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	PAIP1	Q9H074	479 aa	Known RBP	4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	TMEM117	Q9H0C3	514 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	NAPB	Q9H115	298 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	MAGEE1	Q9HCI5	957 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	LTB4R2	Q9NPC1	389 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	TMEM161A	Q9NX61	479 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	ERRFI1	Q9UJM3	462 aa	Predicted RBP	4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	LSM4	Q9Y4Z0	139 aa	Known RBP	4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	CLUH	O75153	1309 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	KDM3A	Q9Y4C1	1321 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	MYH7	P12883	1935 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	KIF26B	Q2KJY2	2108 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	CNOT1	A5YKK6	2376 aa	Known RBP	4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	TEX13C	A0A0J9YWL9	993 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	GSTTP1	A0A1W2PQM5	241 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	TMEM8B	A6NDV4	472 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912		M0QZ92	97 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	MT-CYB	P00156	380 aa	Predicted RBP	4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	LAMP2	P13473	410 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	CCND2	P30279	289 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	GGT5	P36269	586 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	RXRG	P48443	463 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	LIMK1	P53667	647 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	GALNT2	Q10471	571 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	SRSF5	Q13243	272 aa	Known RBP	4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	SF3A2	Q15428	464 aa	Known RBP	4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	LAMA4	Q16363	1823 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	EIF2S3L	Q2VIR3	472 aa	Known RBP	4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	C2orf16	Q68DN1	1984 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	CPLX2	Q6PUV4	134 aa	Known RBP	4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	LCTL	Q6UWM7	567 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	FOXL2NB	Q6ZUU3	175 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	ITPRIP	Q8IWB1	547 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	DCUN1D3	Q8IWE4	304 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	BEST2	Q8NFU1	509 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	LNX1	Q8TBB1	728 aa	Predicted RBP	4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	FGF14	Q92915	247 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	CLDN23	Q96B33	292 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	ZNF707	Q96C28	371 aa	Predicted RBP	4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	NACAP1	Q9BZK3	213 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	PREB	Q9HCU5	417 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	BPIFA1	Q9NP55	256 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	MAP3K20	Q9NYL2	800 aa	Known RBP	4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	HCN3	Q9P1Z3	774 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	RAB23	Q9ULC3	237 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	GINS2	Q9Y248	185 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	MRPL11	Q9Y3B7	192 aa	Known RBP	4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	STON1	Q9Y6Q2	735 aa		4.59	□□□□□ -1.67
PRKD3-208	ENST00000475912	CFAP46	Q8IYW2	2715 aa		4.58	□□□□□ -1.68
PRKD3-208	ENST00000475912	FRMPD4	Q14CM0	1322 aa		4.58	□□□□□ -1.68
PRKD3-208	ENST00000475912	GAGE10	A6NGK3	116 aa		4.58	□□□□□ -1.68
PRKD3-208	ENST00000475912	PRSS47	A8MTI9	375 aa		4.58	□□□□□ -1.68
PRKD3-208	ENST00000475912	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.58	□□□□□ -1.68
PRKD3-208	ENST00000475912	FIBP	O43427	364 aa		4.58	□□□□□ -1.68
PRKD3-208	ENST00000475912	ATP9A	O75110	1047 aa		4.58	□□□□□ -1.68
PRKD3-208	ENST00000475912	RPS6KA5	O75582	802 aa		4.58	□□□□□ -1.68
PRKD3-208	ENST00000475912	RPS9	P46781	194 aa	Known RBP	4.58	□□□□□ -1.68
PRKD3-208	ENST00000475912	FUT6	P51993	359 aa		4.58	□□□□□ -1.68
PRKD3-208	ENST00000475912	SLC20A2	Q08357	652 aa		4.58	□□□□□ -1.68
PRKD3-208	ENST00000475912	RNPS1	Q15287	305 aa	Known RBP	4.58	□□□□□ -1.68
PRKD3-208	ENST00000475912	RBBP5	Q15291	538 aa	Known RBP	4.58	□□□□□ -1.68
PRKD3-208	ENST00000475912	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.58	□□□□□ -1.68
PRKD3-208	ENST00000475912	GPATCH4	Q5T3I0	446 aa	Known RBP	4.58	□□□□□ -1.68
PRKD3-208	ENST00000475912	HIST2H2BC	Q6DN03	193 aa		4.58	□□□□□ -1.68
PRKD3-208	ENST00000475912	HIST2H2BD	Q6DRA6	164 aa		4.58	□□□□□ -1.68
PRKD3-208	ENST00000475912	ACAD10	Q6JQN1	1059 aa		4.58	□□□□□ -1.68
PRKD3-208	ENST00000475912	FAM122C	Q6P4D5	195 aa		4.58	□□□□□ -1.68
PRKD3-208	ENST00000475912	GDPD4	Q6W3E5	623 aa		4.58	□□□□□ -1.68
PRKD3-208	ENST00000475912	SLC36A4	Q6YBV0	504 aa		4.58	□□□□□ -1.68
PRKD3-208	ENST00000475912	GET4	Q7L5D6	327 aa	Predicted RBP	4.58	□□□□□ -1.68
PRKD3-208	ENST00000475912	FAM228A	Q86W67	206 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms