RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ZFP69Q49AA0 526 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 PAQR3Q6TCH7 311 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 ZNF598Q86UK7 904 aaKnown RBP10.76□□□□□ -0.69
VAPB-204ENST00000475243 LAPTM4BQ86VI4 370 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 SYT17Q9BSW7 474 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 COQ10BQ9H8M1 238 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 KHNYNO15037 678 aaKnown RBP10.76□□□□□ -0.69
VAPB-204ENST00000475243 NDUFS4O43181 175 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 PCDH7O60245 1069 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 CYB5AP00167 134 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 PLGP00747 810 aaPredicted RBP10.76□□□□□ -0.69
VAPB-204ENST00000475243 ASLP04424 464 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 KLK1P06870 262 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 MLLT3P42568 568 aaPredicted RBP10.76□□□□□ -0.69
VAPB-204ENST00000475243 CCR8P51685 355 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 PDX1P52945 283 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 GPM6BQ13491 265 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 E2F2Q14209 437 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 CRTC2Q53ET0 693 aaPredicted RBP10.76□□□□□ -0.69
VAPB-204ENST00000475243 ZNF615Q8N8J6 731 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 TMEM145Q8NBT3 493 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 KCNC2Q96PR1 638 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 HIST1H2AAQ96QV6 131 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 ATRNO75882 1429 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 IGLV3-22A0A075B6J6 115 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 TCRBV7S3A2A0A539 114 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 ANXA2P2A6NMY6 339 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 PI15O43692 258 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 AIREO43918 545 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 ANXA2P07355 339 aaKnown RBP10.76□□□□□ -0.69
VAPB-204ENST00000475243 HTR7P34969 479 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 ACTR1BP42025 376 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 ACTR1AP61163 376 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 HMGCS1Q01581 520 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 CRHR2Q13324 411 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 LINGO2Q7L985 606 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 ZZZ3Q8IYH5 903 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 RASSF5Q8WWW0 418 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 HAPLN3Q96S86 360 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 GTPBP2Q9BX10 602 aaKnown RBP10.76□□□□□ -0.69
VAPB-204ENST00000475243 B3GNT4Q9C0J1 378 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 ZNF180Q9UJW8 692 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 SPATA31D1Q6ZQQ2 1576 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 GNSP15586 552 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 VBP1P61758 197 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 MFSD5Q6N075 450 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 CCSER2Q9H7U1 834 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 TLR6Q9Y2C9 796 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 A0A0G2JLL6 359 aaPredicted RBP10.76□□□□□ -0.69
VAPB-204ENST00000475243 K7EPI3 171 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 WNT9AO14904 365 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 SNX4O95219 450 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 ALPPP05187 535 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 SOWAHAQ2M3V2 549 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 TCEAL6Q6IPX3 200 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 PRRT2Q7Z6L0 340 aaPredicted RBP10.76□□□□□ -0.69
VAPB-204ENST00000475243 CAND1Q86VP6 1230 aaKnown RBP10.76□□□□□ -0.69
VAPB-204ENST00000475243 POP5Q969H6 163 aaKnown RBP10.76□□□□□ -0.69
VAPB-204ENST00000475243 BORCS5Q969J3 196 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 NSMCE3Q96MG7 304 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 C7orf26Q96N11 449 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 PNPLA8Q9NP80 782 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 ABI3Q9P2A4 366 aa10.76□□□□□ -0.69
VAPB-204ENST00000475243 PEAK1Q9H792 1746 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 PCDHGA12O60330 932 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 SIX3O95343 332 aaPredicted RBP10.75□□□□□ -0.69
VAPB-204ENST00000475243 ESR1P03372 595 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 SIRPB2Q5JXA9 342 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 ZNF516Q92618 1163 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 PCBD2Q9H0N5 130 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 MED28Q9H204 178 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 CNTN6Q9UQ52 1028 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 MRPS17Q9Y2R5 130 aaKnown RBP10.75□□□□□ -0.69
VAPB-204ENST00000475243 MID1O15344 667 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 SEMA3DO95025 777 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 VNN1O95497 513 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 GBAP04062 536 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 MTHFD1P11586 935 aaKnown RBP10.75□□□□□ -0.69
VAPB-204ENST00000475243 VARSP26640 1264 aaKnown RBP10.75□□□□□ -0.69
VAPB-204ENST00000475243 OR2AJ1Q8NGZ0 328 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 NAT14Q8WUY8 206 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 DUSP26Q9BV47 211 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 UNC93B1Q9H1C4 597 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 SUV39H2Q9H5I1 410 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 TCF7L1Q9HCS4 588 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 ETAA1Q9NY74 926 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 WRAP73Q9P2S5 460 aaPredicted RBP10.75□□□□□ -0.69
VAPB-204ENST00000475243 PLAGL1Q9UM63 463 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 SLC7A1P30825 629 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 PTGIRP43119 386 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 AP2S1P53680 142 aaPredicted RBP10.75□□□□□ -0.69
VAPB-204ENST00000475243 COL9A2Q14055 689 aaPredicted RBP10.75□□□□□ -0.69
VAPB-204ENST00000475243 SLBPQ14493 270 aaKnown RBP eCLIP10.75□□□□□ -0.69
VAPB-204ENST00000475243 IFI44LQ53G44 452 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 CARD16Q5EG05 197 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 PIM3Q86V86 326 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 DENND2DQ9H6A0 471 aaPredicted RBP10.75□□□□□ -0.69
VAPB-204ENST00000475243 AMBNQ9NP70 447 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 GMEB2Q9UKD1 530 aa10.75□□□□□ -0.69
VAPB-204ENST00000475243 RAB26Q9ULW5 256 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms