RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 GPATCH11Q8N954 259 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 AGBL5Q8NDL9 886 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 OR2L8Q8NGY9 312 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 SLC44A1Q8WWI5 657 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 JPH3Q8WXH2 748 aaPredicted RBP16.41■□□□□ 0.22
SCAF11-206ENST00000474828 UBXN4Q92575 508 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 DLG3Q92796 817 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 NXPE2Q96DL1 559 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 SLC46A1Q96NT5 459 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 CMKLR1Q99788 373 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 DHRS4Q9BTZ2 278 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 SLC12A9Q9BXP2 914 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 SYNDIG1Q9H7V2 258 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 ASCL3Q9NQ33 180 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 SPATA7Q9P0W8 599 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 FETUBQ9UGM5 382 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 RUVBL2Q9Y230 463 aaKnown RBP16.41■□□□□ 0.22
SCAF11-206ENST00000474828 KLK4Q9Y5K2 254 aa16.41■□□□□ 0.22
SCAF11-206ENST00000474828 CDRT15L2A8MXV6 281 aa16.4■□□□□ 0.22
SCAF11-206ENST00000474828 B4E171 279 aa16.4■□□□□ 0.22
SCAF11-206ENST00000474828 RIPK2O43353 540 aa16.4■□□□□ 0.22
SCAF11-206ENST00000474828 CATP04040 527 aaKnown RBP16.4■□□□□ 0.22
SCAF11-206ENST00000474828 C8GP07360 202 aa16.4■□□□□ 0.22
SCAF11-206ENST00000474828 PRDX3P30048 256 aaKnown RBP16.4■□□□□ 0.22
SCAF11-206ENST00000474828 TSPAN7P41732 249 aa16.4■□□□□ 0.22
SCAF11-206ENST00000474828 KPNA2P52292 529 aaKnown RBP16.4■□□□□ 0.22
SCAF11-206ENST00000474828 PMS2P54278 862 aa16.4■□□□□ 0.22
SCAF11-206ENST00000474828 PDAP1Q13442 181 aaKnown RBP16.4■□□□□ 0.22
SCAF11-206ENST00000474828 KIR2DS3Q14952 304 aa16.4■□□□□ 0.22
SCAF11-206ENST00000474828 TTC23LQ6PF05 361 aa16.4■□□□□ 0.22
SCAF11-206ENST00000474828 PIWIL4Q7Z3Z4 852 aaKnown RBP16.4■□□□□ 0.22
SCAF11-206ENST00000474828 CLEC14AQ86T13 490 aa16.4■□□□□ 0.22
SCAF11-206ENST00000474828 PPM1NQ8N819 430 aa16.4■□□□□ 0.22
SCAF11-206ENST00000474828 OR9A1PQ8NGU1 263 aa16.4■□□□□ 0.22
SCAF11-206ENST00000474828 ISL2Q96A47 359 aa16.4■□□□□ 0.22
SCAF11-206ENST00000474828 ELMO2Q96JJ3 720 aa16.4■□□□□ 0.22
SCAF11-206ENST00000474828 UBXN10Q96LJ8 280 aa16.4■□□□□ 0.22
SCAF11-206ENST00000474828 C1GALT1Q9NS00 363 aa16.4■□□□□ 0.22
SCAF11-206ENST00000474828 TXNDC16Q9P2K2 825 aa16.4■□□□□ 0.22
SCAF11-206ENST00000474828 ZNF180Q9UJW8 692 aa16.4■□□□□ 0.22
SCAF11-206ENST00000474828 ACSL6Q9UKU0 697 aa16.4■□□□□ 0.22
SCAF11-206ENST00000474828 SATB2Q9UPW6 733 aa16.4■□□□□ 0.22
SCAF11-206ENST00000474828 SSUH2Q9Y2M2 353 aa16.4■□□□□ 0.22
SCAF11-206ENST00000474828 PCDHGA7Q9Y5G6 932 aa16.4■□□□□ 0.22
SCAF11-206ENST00000474828 PCDHGA3Q9Y5H0 932 aa16.4■□□□□ 0.22
SCAF11-206ENST00000474828 DMXL2Q8TDJ6 3036 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 A0A087WUV0 522 aaPredicted RBP16.39■□□□□ 0.21
SCAF11-206ENST00000474828 C2orf74A8MZ97 194 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 KIF1CO43896 1103 aaKnown RBP16.39■□□□□ 0.21
SCAF11-206ENST00000474828 FAM155BO75949 473 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 FKBP9O95302 570 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 ACSL3O95573 720 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 ITGA2BP08514 1039 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 CHRM5P08912 532 aaPredicted RBP16.39■□□□□ 0.21
SCAF11-206ENST00000474828 FGF3P11487 239 aaPredicted RBP16.39■□□□□ 0.21
SCAF11-206ENST00000474828 NELFEP18615 380 aaKnown RBP16.39■□□□□ 0.21
SCAF11-206ENST00000474828 POLR2CP19387 275 aaPredicted RBP16.39■□□□□ 0.21
SCAF11-206ENST00000474828 PEBP1P30086 187 aaKnown RBP16.39■□□□□ 0.21
SCAF11-206ENST00000474828 HSD17B2P37059 387 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 SLC26A3P40879 764 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 ERVPABLB-1P60509 514 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 EFTUD2Q15029 972 aaKnown RBP eCLIP16.39■□□□□ 0.21
SCAF11-206ENST00000474828 PHF19Q5T6S3 580 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 CTAGE3PQ8IX95 158 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 LRRC56Q8IYG6 542 aaPredicted RBP16.39■□□□□ 0.21
SCAF11-206ENST00000474828 NKAPQ8N5F7 415 aaKnown RBP16.39■□□□□ 0.21
SCAF11-206ENST00000474828 KDF1Q8NAX2 398 aaPredicted RBP16.39■□□□□ 0.21
SCAF11-206ENST00000474828 RCBTB1Q8NDN9 531 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 CFAP61Q8NHU2 1237 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 LINGO1Q96FE5 620 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 TSPAN17Q96FV3 270 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 TGM7Q96PF1 710 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 OR2A14Q96R47 310 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 XKR8Q9H6D3 395 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 SYTL2Q9HCH5 934 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 FBXO8Q9NRD0 319 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 ENAMQ9NRM1 1142 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 SPHK1Q9NYA1 384 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 NOVA2Q9UNW9 492 aaKnown RBP16.39■□□□□ 0.21
SCAF11-206ENST00000474828 BTRCQ9Y297 605 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 LOXL2Q9Y4K0 774 aa16.39■□□□□ 0.21
SCAF11-206ENST00000474828 IGHV5-51A0A0C4DH38 117 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 A0A1W2PPV9 198 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 PIPSLA2A3N6 862 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 PMS2P1A4D2B8 440 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 TMEM8BA6NDV4 472 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 ZBTB14O43829 449 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 MPSTP25325 297 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 MAGEA12P43365 314 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 BDKRB1P46663 353 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 PGGT1BP53609 377 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 GABREP78334 506 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 MC2RQ01718 297 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 PRKAA1Q13131 559 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 PPP1R3AQ16821 1122 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 SLC5A12Q1EHB4 618 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 ANKS6Q68DC2 871 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 SPESP1Q6UW49 350 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 SBSNQ6UWP8 590 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 UNQ6494/PRO21346Q6UXR6 183 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms