RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 VCXQ9H320 206 aa4.75□□□□□ -1.65
TM4SF1-202ENST00000472441 ALG2Q9H553 416 aa4.75□□□□□ -1.65
TM4SF1-202ENST00000472441 CXorf56Q9H5V9 222 aa4.75□□□□□ -1.65
TM4SF1-202ENST00000472441 NANOGQ9H9S0 305 aa4.75□□□□□ -1.65
TM4SF1-202ENST00000472441 ZIM2Q9NZV7 527 aa4.75□□□□□ -1.65
TM4SF1-202ENST00000472441 RIMS3Q9UJD0 308 aa4.75□□□□□ -1.65
TM4SF1-202ENST00000472441 CFAP47Q6ZTR5 3102 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 FRYQ5TBA9 3013 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 BOD1L1Q8NFC6 3051 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 PRSS51A0A1B0GVH4 220 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 FAM149AA5PLN7 773 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 MAGEA13PA6NCF6 341 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 SOBPA7XYQ1 873 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 CASQ2O14958 399 aaPredicted RBP4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 SCAMP1O15126 338 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 HOXC11O43248 304 aaPredicted RBP4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 RNASEH1O60930 286 aaKnown RBP4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 ATG13O75143 517 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 EEDO75530 441 aaKnown RBP4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 MT-ND1P03886 318 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 MPC1LP0DKB6 136 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 EPORP19235 508 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 PSMD8P48556 350 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 GSK3BP49841 420 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 IRF8Q02556 426 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 GRIK2Q13002 908 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 CHIT1Q13231 466 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 CYP51A1Q16850 503 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 FAM174BQ3ZCQ3 159 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 CMPK2Q5EBM0 449 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 MTX3Q5HYI7 312 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 TBCELQ5QJ74 424 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 LDLRAP1Q5SW96 308 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 KIAA2013Q8IYS2 634 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 DDHD1Q8NEL9 900 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 OR2T34Q8NGX1 318 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 OR2T3Q8NH03 318 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 SUSD6Q92537 303 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 TMEM125Q96AQ2 219 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 SLCO4A1Q96BD0 722 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 TIFAQ96CG3 184 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 LRIG1Q96JA1 1093 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 CNBD2Q96M20 576 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 TSSK3Q96PN8 268 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 SEPHS2Q99611 448 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 CIB1Q99828 191 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 CCM2Q9BSQ5 444 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 EFHD1Q9BUP0 239 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 ACTL8Q9H568 366 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 DNAJC11Q9NVH1 559 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 THG1LQ9NWX6 298 aaKnown RBP4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 PRKAB1Q9Y478 270 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 PCDHA9Q9Y5H5 950 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 ST14Q9Y5Y6 855 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 PRR23AA6NEV1 266 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 ARHGEF33A8MVX0 844 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 GFYI3L273 518 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 ARPC2O15144 300 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 SMNDC1O75940 238 aaKnown RBP eCLIP4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 LYNP07948 512 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 TCF3P15923 654 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 CKMT2P17540 419 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 VARSP26640 1264 aaKnown RBP4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 SLC7A1P30825 629 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 ERVK-21P61565 698 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 SELPLGQ14242 412 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 SF1Q15637 639 aaKnown RBP4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 MAPKAPK3Q16644 382 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 PGS1Q32NB8 556 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 HNRNPA1L2Q32P51 320 aaKnown RBP4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 XKR6Q5GH73 641 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 SPANXN4Q5MJ08 99 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 C6orf52Q5T4I8 152 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 PDE12Q6L8Q7 609 aaKnown RBP4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 DOK6Q6PKX4 331 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 CRTC3Q6UUV7 619 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 SUSD1Q6UWL2 747 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 TRMT11Q7Z4G4 463 aaKnown RBP4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 ETFBKMTQ8IXQ9 262 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 YAF2Q8IY57 180 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 C2orf73Q8N5S3 287 aaPredicted RBP4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 TMEM102Q8N9M5 508 aaPredicted RBP4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 GATA6Q92908 595 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 APOLD1Q96LR9 279 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 FOPNLQ96NB1 174 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 MTERF1Q99551 399 aaKnown RBP4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 THUMPD3Q9BV44 507 aaKnown RBP4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 PBX4Q9BYU1 374 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 ACPTQ9BZG2 426 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 NKX2-4Q9H2Z4 354 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 COQ10BQ9H8M1 238 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 SFXN1Q9H9B4 322 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 HEBP1Q9NRV9 189 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 RAD18Q9NS91 495 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 C1orf109Q9NX04 203 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 KLHL42Q9P2K6 505 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 ABCD2Q9UBJ2 740 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 DKK3Q9UBP4 350 aa4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.74□□□□□ -1.65
TM4SF1-202ENST00000472441 TRPS1Q9UHF7 1281 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms