RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 ABI3Q9P2A4 366 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 NFKBIL1Q9UBC1 381 aaPredicted RBP6.6□□□□□ -1.35
HDAC1-204ENST00000471488 CIDEBQ9UHD4 219 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 IP6K2Q9UHH9 426 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 C3orf18Q9UK00 162 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 NPIPA1Q9UND3 350 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 PLCL2Q9UPR0 1127 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 MEMO1Q9Y316 297 aa6.6□□□□□ -1.35
HDAC1-204ENST00000471488 A0A0A6YYK5 440 aaPredicted RBP6.59□□□□□ -1.35
HDAC1-204ENST00000471488 NKX2-6A6NCS4 301 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 CFAP99D6REC4 459 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 MYO1FO00160 1098 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 FFAR3O14843 346 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 GPR42O15529 346 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 PRAMEF2O60811 474 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 EIF2S1P05198 315 aaKnown RBP6.59□□□□□ -1.35
HDAC1-204ENST00000471488 CHRM5P08912 532 aaPredicted RBP6.59□□□□□ -1.35
HDAC1-204ENST00000471488 MSL3P1P0C860 447 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 PRR35P0CG20 571 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 MYBL1P10243 752 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 TNNT1P13805 278 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 MAGP20916 626 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 PDHA2P29803 388 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 DNAJA1P31689 397 aaKnown RBP6.59□□□□□ -1.35
HDAC1-204ENST00000471488 HMGCLP35914 325 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 ARSFP54793 590 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 CSE1LP55060 971 aaKnown RBP6.59□□□□□ -1.35
HDAC1-204ENST00000471488 FANCCQ00597 558 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 HSF1Q00613 529 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 ALDH6A1Q02252 535 aaKnown RBP6.59□□□□□ -1.35
HDAC1-204ENST00000471488 KLC1Q07866 573 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 DSG2Q14126 1118 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 INAQ16352 499 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 SIRPB2Q5JXA9 342 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 MFSD4BQ5TF39 518 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 ABHD17BQ5VST6 288 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 ZDHHC20Q5W0Z9 365 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 UNC5AQ6ZN44 842 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 CEP128Q6ZU80 1094 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 NEK10Q6ZWH5 1172 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 NLRP9Q7RTR0 991 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 ZNF571Q7Z3V5 609 aaPredicted RBP6.59□□□□□ -1.35
HDAC1-204ENST00000471488 CPNE8Q86YQ8 564 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 RFX6Q8HWS3 928 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 TGIF2LYQ8IUE0 185 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 SPPL2CQ8IUH8 684 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 MCATQ8IVS2 390 aaKnown RBP6.59□□□□□ -1.35
HDAC1-204ENST00000471488 LMNTD1Q8N9Z9 388 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 OR5AR1Q8NGP9 310 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 DNAJB8Q8NHS0 232 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 HM13Q8TCT9 377 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 ADAMTS18Q8TE60 1221 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 AGAP11Q8TF27 550 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 TFGQ92734 400 aaPredicted RBP6.59□□□□□ -1.35
HDAC1-204ENST00000471488 FKBP10Q96AY3 582 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 PWWP2AQ96N64 755 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 TSGA13Q96PP4 275 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 OR2A14Q96R47 310 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 SRPK1Q96SB4 655 aaKnown RBP6.59□□□□□ -1.35
HDAC1-204ENST00000471488 SPSB2Q99619 263 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 SPOCK3Q9BQ16 436 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 FSD1LQ9BXM9 530 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 THAP2Q9H0W7 228 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 SLC25A51Q9H1U9 297 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 GLOD4Q9HC38 313 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 CUTCQ9NTM9 273 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 EURLQ9NYK6 297 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 STMN3Q9NZ72 180 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 STOX2Q9P2F5 926 aaPredicted RBP6.59□□□□□ -1.35
HDAC1-204ENST00000471488 NXT1Q9UKK6 140 aaKnown RBP6.59□□□□□ -1.35
HDAC1-204ENST00000471488 ICKQ9UPZ9 632 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 ASF1AQ9Y294 204 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 ARL5AQ9Y689 179 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 FBN3Q75N90 2809 aa6.59□□□□□ -1.35
HDAC1-204ENST00000471488 LRRD1A4D1F6 860 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 OR5H15A6NDH6 313 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 LGALS16A8MUM7 142 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 DDX3XO00571 662 aaKnown RBP eCLIP6.58□□□□□ -1.36
HDAC1-204ENST00000471488 APOL1O14791 398 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 DSCR3O14972 297 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 PPP1R12AO14974 1030 aaPredicted RBP6.58□□□□□ -1.36
HDAC1-204ENST00000471488 TTI1O43156 1089 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 FAM155BO75949 473 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 SLCO2B1O94956 709 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 MLYCDO95822 493 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 HEXBP07686 556 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 AGAP20933 346 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 ADSLP30566 484 aaPredicted RBP6.58□□□□□ -1.36
HDAC1-204ENST00000471488 SHMT2P34897 504 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 CARSP49589 748 aaKnown RBP6.58□□□□□ -1.36
HDAC1-204ENST00000471488 WNT3AP56704 352 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 UBE2HP62256 183 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 IFI35P80217 286 aaPredicted RBP6.58□□□□□ -1.36
HDAC1-204ENST00000471488 LTBQ06643 244 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 PPIDQ08752 370 aaKnown RBP6.58□□□□□ -1.36
HDAC1-204ENST00000471488 FOXD4Q12950 439 aaPredicted RBP6.58□□□□□ -1.36
HDAC1-204ENST00000471488 OLIG2Q13516 323 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 LONRF1Q17RB8 773 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 SLC5A12Q1EHB4 618 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 SYTL3Q4VX76 610 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms