RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 ATP1A1-AS1Q5TC04 95 aa17.66■□□□□ 0.42
PHGDH-204ENST00000469443 NEPROQ6NW34 567 aa17.66■□□□□ 0.42
PHGDH-204ENST00000469443 FAM199XQ6PEV8 388 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-204ENST00000469443 ZNF669Q96BR6 464 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-204ENST00000469443 TCTN2Q96GX1 697 aa17.66■□□□□ 0.42
PHGDH-204ENST00000469443 TRIM56Q9BRZ2 755 aaKnown RBP17.66■□□□□ 0.42
PHGDH-204ENST00000469443 AKIRIN1Q9H9L7 192 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-204ENST00000469443 STARD5Q9NSY2 213 aa17.66■□□□□ 0.42
PHGDH-204ENST00000469443 SERTAD3Q9UJW9 196 aa17.66■□□□□ 0.42
PHGDH-204ENST00000469443 BSNQ9UPA5 3926 aa17.66■□□□□ 0.42
PHGDH-204ENST00000469443 A0A0J9YY10 115 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 USP27XA6NNY8 438 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 ISM1B1AKI9 464 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 H3BMM5 538 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 CREG1O75629 220 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 RECKO95980 971 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 ESR1P03372 595 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 KLK3P07288 261 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-204ENST00000469443 CYP2A7P20853 494 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 PEBP1P30086 187 aaKnown RBP17.65■□□□□ 0.42
PHGDH-204ENST00000469443 FMO4P31512 558 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 ADARP55265 1226 aaKnown RBP17.65■□□□□ 0.42
PHGDH-204ENST00000469443 ITGA1P56199 1179 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 POLE2P56282 527 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 NFATC3Q12968 1075 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 ERV3-1Q14264 604 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 GRB7Q14451 532 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 PPP1R7Q15435 360 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 SLC5A12Q1EHB4 618 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 DEFB109BQ30KR1 87 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 ZNF789Q5FWF6 425 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 PRAMEF17Q5VTA0 474 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 TTC23LQ6PF05 361 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 CDHR3Q6ZTQ4 885 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 CENPUQ71F23 418 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 TMEM135Q86UB9 458 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 CILP2Q8IUL8 1156 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 PPIL6Q8IXY8 311 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 SLC38A9Q8NBW4 561 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 MR1Q95460 341 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 MENTQ9BUN1 341 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 GPR87Q9BY21 358 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 CHRNA10Q9GZZ6 450 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 INTS10Q9NVR2 710 aaKnown RBP17.65■□□□□ 0.42
PHGDH-204ENST00000469443 VPS9D1Q9Y2B5 631 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 MRFAP1Q9Y605 127 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 ANKRD12Q6UB98 2062 aa17.65■□□□□ 0.42
PHGDH-204ENST00000469443 NIPSNAP2O75323 286 aa17.64■□□□□ 0.41
PHGDH-204ENST00000469443 PLA2G2AP14555 144 aa17.64■□□□□ 0.41
PHGDH-204ENST00000469443 RPS15P62841 145 aaKnown RBP17.64■□□□□ 0.41
PHGDH-204ENST00000469443 KCNAB2Q13303 367 aa17.64■□□□□ 0.41
PHGDH-204ENST00000469443 THOC5Q13769 683 aaKnown RBP17.64■□□□□ 0.41
PHGDH-204ENST00000469443 ZIC1Q15915 447 aa17.64■□□□□ 0.41
PHGDH-204ENST00000469443 ZNF517Q6ZMY9 492 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-204ENST00000469443 DSELQ8IZU8 1212 aa17.64■□□□□ 0.41
PHGDH-204ENST00000469443 LINC01555Q8NAE3 123 aa17.64■□□□□ 0.41
PHGDH-204ENST00000469443 OR2L8Q8NGY9 312 aa17.64■□□□□ 0.41
PHGDH-204ENST00000469443 SKA2Q8WVK7 121 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-204ENST00000469443 APOBEC4Q8WW27 367 aaKnown RBP17.64■□□□□ 0.41
PHGDH-204ENST00000469443 CLIP3Q96DZ5 547 aa17.64■□□□□ 0.41
PHGDH-204ENST00000469443 SIGLEC10Q96LC7 697 aa17.64■□□□□ 0.41
PHGDH-204ENST00000469443 RUFY1Q96T51 708 aa17.64■□□□□ 0.41
PHGDH-204ENST00000469443 DDX47Q9H0S4 455 aaKnown RBP17.64■□□□□ 0.41
PHGDH-204ENST00000469443 ACTL8Q9H568 366 aa17.64■□□□□ 0.41
PHGDH-204ENST00000469443 ACTR5Q9H9F9 607 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-204ENST00000469443 FAM60AQ9NP50 221 aa17.64■□□□□ 0.41
PHGDH-204ENST00000469443 IL1RAPL1Q9NZN1 696 aa17.64■□□□□ 0.41
PHGDH-204ENST00000469443 CIDEBQ9UHD4 219 aa17.64■□□□□ 0.41
PHGDH-204ENST00000469443 TUBD1Q9UJT1 453 aa17.64■□□□□ 0.41
PHGDH-204ENST00000469443 CRYL1Q9Y2S2 319 aa17.64■□□□□ 0.41
PHGDH-204ENST00000469443 NFS1Q9Y697 457 aa17.64■□□□□ 0.41
PHGDH-204ENST00000469443 HEATR5BQ9P2D3 2071 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 ZCWPW2A0A1B0GU75 182 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 E7EQ34 232 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 MEN1O00255 615 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 RASGRF2O14827 1237 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 USP1O94782 785 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 S1PR4O95977 384 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 FURINP09958 794 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 PKMP14618 531 aaKnown RBP17.63■□□□□ 0.41
PHGDH-204ENST00000469443 CHRM3P20309 590 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 CD9P21926 228 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 PTPN4P29074 926 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 RORAP35398 523 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 GABRA4P48169 554 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 GBX1Q14549 363 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 RNASEH2BQ5TBB1 312 aaKnown RBP17.63■□□□□ 0.41
PHGDH-204ENST00000469443 ZNF470Q6ECI4 717 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 GPR135Q8IZ08 494 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 AGGF1Q8N302 714 aaeCLIP17.63■□□□□ 0.41
PHGDH-204ENST00000469443 SEC14L1Q92503 715 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 N4BP2L2Q92802 583 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-204ENST00000469443 SLCO2A1Q92959 643 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 RAD51AP1Q96B01 352 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 SLC22A18Q96BI1 424 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 FOPNLQ96NB1 174 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 IL17FQ96PD4 163 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 RAB11FIP5Q9BXF6 653 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 FAM117AQ9C073 453 aa17.63■□□□□ 0.41
PHGDH-204ENST00000469443 SLC25A18Q9H1K4 315 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms