RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 ZNF250P15622 560 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 MYL12AP19105 171 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 GRK5P34947 590 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 ARL2P36404 184 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 SLC1A2P43004 574 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 NRIP1P48552 1158 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 RRAS2P62070 204 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 SNRPD2P62316 118 aaKnown RBP8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 ERVK-8P63133 956 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 SH3BP2P78314 561 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 PSPHP78330 225 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 NFIAQ12857 509 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 OLIG2Q13516 323 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 EIF4HQ15056 248 aaKnown RBP8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 GRK1Q15835 563 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 BAK1Q16611 211 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 XKR3Q5GH77 459 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 HABP4Q5JVS0 413 aaKnown RBP8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 LRRC66Q68CR7 880 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 ANKRD34AQ69YU3 496 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 APOBEC3HQ6NTF7 200 aaKnown RBP8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 KIAA1324Q6UXG2 1013 aaKnown RBP8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 DLEU7Q6UYE1 221 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 RPS27LQ71UM5 84 aaKnown RBP8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 P3H2Q8IVL5 708 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 CDAN1Q8IWY9 1227 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 NIM1KQ8IY84 436 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 TAGAPQ8N103 731 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 OR8H3Q8N146 312 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 CYP4Z2PQ8N1L4 340 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 FAM86B1Q8N7N1 296 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 ZNF366Q8N895 744 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 ZNF680Q8NEM1 530 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 PPHLN1Q8NEY8 458 aaKnown RBP8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 FAM162AQ96A26 154 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 TMEM209Q96SK2 561 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 MRPL4Q9BYD3 311 aaKnown RBP8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 COA1Q9GZY4 146 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 C11orf54Q9H0W9 315 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 SLC6A17Q9H1V8 727 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 OR51E2Q9H255 320 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 SRP68Q9UHB9 627 aaKnown RBP8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 MUTYHQ9UIF7 546 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 TSPAN16Q9UKR8 245 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 FZD10Q9ULW2 581 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 TMX2Q9Y320 296 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 PRELID3BQ9Y3B1 194 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 DOCK1Q14185 1865 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 IQCMA0A1B0GVH7 501 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 FZD6O60353 706 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 RAF1P04049 648 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 PFKMP08237 780 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 RRASP10301 218 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 PFKLP17858 780 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 RAB3AP20336 220 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 PRKACGP22612 351 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 KELP23276 732 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 RPS3P23396 243 aaKnown RBP eCLIP8.83□□□□□ -1
SMARCE1-207ENST00000469334 SOX11P35716 441 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 CASP2P42575 452 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 MAGEA2P43356 314 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 EFNA5P52803 228 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 PLK1P53350 603 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 PGGT1BP53609 377 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 UBE3AQ05086 875 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 CTBP1Q13363 440 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 LAPTM5Q13571 262 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 SIM2Q14190 667 aaPredicted RBP8.83□□□□□ -1
SMARCE1-207ENST00000469334 PGM5Q15124 567 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 TATDN3Q17R31 274 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 INTS6LQ5JSJ4 861 aaKnown RBP8.83□□□□□ -1
SMARCE1-207ENST00000469334 CACHD1Q5VU97 1274 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 CPZQ66K79 652 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 GPR139Q6DWJ6 353 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 KIAA0930Q6ICG6 404 aaPredicted RBP8.83□□□□□ -1
SMARCE1-207ENST00000469334 GDPGP1Q6ZNW5 385 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 C16orf62Q7Z3J2 963 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 GPR149Q86SP6 731 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 CYP4Z1Q86W10 505 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 TMC8Q8IU68 726 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 DENND6AQ8IWF6 608 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 CHPFQ8IZ52 775 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 RNF139Q8WU17 664 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 FBXW5Q969U6 566 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 C18orf25Q96B23 403 aaPredicted RBP8.83□□□□□ -1
SMARCE1-207ENST00000469334 COQ8BQ96D53 544 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 MASTLQ96GX5 879 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 ZNF583Q96ND8 569 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 SECISBP2Q96T21 854 aaKnown RBP8.83□□□□□ -1
SMARCE1-207ENST00000469334 KCNS3Q9BQ31 491 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 USB1Q9BQ65 265 aaKnown RBP8.83□□□□□ -1
SMARCE1-207ENST00000469334 CHCHD6Q9BRQ6 235 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 RHNO1Q9BSD3 238 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 HTATIP2Q9BUP3 242 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 BBS2Q9BXC9 721 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 TUBB1Q9H4B7 451 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 TRIM45Q9H8W5 580 aaPredicted RBP8.83□□□□□ -1
SMARCE1-207ENST00000469334 IFT46Q9NQC8 304 aa8.83□□□□□ -1
SMARCE1-207ENST00000469334 DCAF13Q9NV06 445 aaKnown RBP8.83□□□□□ -1
SMARCE1-207ENST00000469334 COQ3Q9NZJ6 369 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms