RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, human

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPA-211	ENST00000466538	LMO3	Q8TAP4	145 aa		4.09	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	FGFBP3	Q8TAT2	258 aa		4.09	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	SECTM1	Q8WVN6	248 aa		4.09	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	OTUB1	Q96FW1	271 aa	Predicted RBP	4.09	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	CCDC114	Q96M63	670 aa		4.09	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	INPP5K	Q9BT40	448 aa		4.09	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	MLPH	Q9BV36	600 aa	Predicted RBP	4.09	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	MIS12	Q9H081	205 aa		4.09	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	CHCHD3	Q9NX63	227 aa	Known RBP	4.09	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	RNF150	Q9ULK6	438 aa		4.09	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	SLC7A7	Q9UM01	511 aa		4.09	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	PCDHGB1	Q9Y5G3	927 aa		4.09	□□□□□ -1.75
CDC42BPA-211	ENST00000466538	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	4.09	□□□□□ -1.75
CDC42BPA-211	ENST00000466538		A0A1W2PN81	502 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	ENO4	A6NNW6	628 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	C16orf97	H3BN30	126 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	DNM1L	O00429	736 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	SLC7A4	O43246	635 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	LUC7L3	O95232	432 aa	Known RBP	4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	PIGN	O95427	931 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	SMIM18	P0DKX4	95 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	MYL6B	P14649	208 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	DGKA	P23743	735 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	CCKAR	P32238	428 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	PTGER4	P35408	488 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	CHRNA7	P36544	502 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	TUBB4B	P68371	445 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	MBTD1	Q05BQ5	628 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	ILF3	Q12906	894 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	COASY	Q13057	564 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	DMP1	Q13316	513 aa	Predicted RBP	4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	ASIC2	Q16515	512 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	CDO1	Q16878	200 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	IZUMO4	Q1ZYL8	232 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	MCMDC2	Q4G0Z9	681 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	STXBP5	Q5T5C0	1151 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	CYP4A22	Q5TCH4	519 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	MFSD6	Q6ZSS7	791 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	NFE4	Q86UQ8	179 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	PLD3	Q8IV08	490 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	RYBP	Q8N488	228 aa	Predicted RBP	4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	MAB21L3	Q8N8X9	362 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	THAP8	Q8NA92	274 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	OR2T12	Q8NG77	320 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	GRAPL	Q8TC17	118 aa	Predicted RBP	4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	ZNF473	Q8WTR7	871 aa	Known RBP	4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	CORO2A	Q92828	525 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	MR1	Q95460	341 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	MYADM	Q96S97	322 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	RTP3	Q9BQQ7	232 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	KATNB1	Q9BVA0	655 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	KRTAP4-2	Q9BYR5	136 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	PANK2	Q9BZ23	570 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	PCDH11Y	Q9BZA8	1340 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	RSPH9	Q9H1X1	276 aa	Predicted RBP	4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	GKN1	Q9NS71	199 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	FAM118A	Q9NWS6	357 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	TXNDC16	Q9P2K2	825 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	DNAJB9	Q9UBS3	223 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	MTUS1	Q9ULD2	1270 aa		4.08	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	CAPN9	O14815	690 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	SLC30A4	O14863	429 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	PRKRA	O75569	313 aa	Known RBP	4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	FAM58BP	P0C7Q3	252 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	HSPA8	P11142	646 aa	Known RBP	4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	CETP	P11597	493 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	IRF2	P14316	349 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	PLA2G2A	P14555	144 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	GNAZ	P19086	355 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	MSH3	P20585	1137 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	PDX1	P52945	283 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	DVL1P1	P54792	670 aa	Predicted RBP	4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	PTK6	Q13882	451 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	VEZF1	Q14119	521 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	CA9	Q16790	459 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	ZRANB3	Q5FWF4	1079 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	TCTE1	Q5JU00	501 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	WBP2NL	Q6ICG8	309 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	CAPRIN2	Q6IMN6	1127 aa	Known RBP	4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	NOTUM	Q6P988	496 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	ZNF449	Q6P9G9	518 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	ARHGAP22	Q7Z5H3	698 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	PHLDB2	Q86SQ0	1253 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	DZIP1	Q86YF9	867 aa	Known RBP	4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	CFAP206	Q8IYR0	622 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	TMCO5A	Q8N6Q1	288 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	HSD17B8	Q92506	261 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	NSMAF	Q92636	917 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	RAD54L	Q92698	747 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	CD101	Q93033	1021 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	HES6	Q96HZ4	224 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	RAD9A	Q99638	391 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	GTPBP2	Q9BX10	602 aa	Known RBP	4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	KRTAP4-5	Q9BYR2	181 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	C2orf40	Q9H1Z8	148 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	TRPV4	Q9HBA0	871 aa		4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	DDX43	Q9NXZ2	648 aa	Known RBP	4.07	□□□□□ -1.76
CDC42BPA-211	ENST00000466538	COQ3	Q9NZJ6	369 aa		4.07	□□□□□ -1.76

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