RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ATP6V0D1P61421 351 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 ROR2Q01974 943 aaKnown RBP18.17■□□□□ 0.5
CAPN3-209ENST00000466222 GBX1Q14549 363 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 BCL7AQ4VC05 210 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 GCNT7Q6ZNI0 430 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 FAM83HQ6ZRV2 1179 aaPredicted RBP18.17■□□□□ 0.5
CAPN3-209ENST00000466222 CFAP206Q8IYR0 622 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 SNX19Q92543 992 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 PDLIM5Q96HC4 596 aaKnown RBP18.17■□□□□ 0.5
CAPN3-209ENST00000466222 ZCCHC2Q9C0B9 1178 aaKnown RBP18.17■□□□□ 0.5
CAPN3-209ENST00000466222 EML4Q9HC35 981 aaKnown RBP18.17■□□□□ 0.5
CAPN3-209ENST00000466222 PHPT1Q9NRX4 125 aaPredicted RBP18.17■□□□□ 0.5
CAPN3-209ENST00000466222 ZNHIT2Q9UHR6 403 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 PNMA8BQ9ULN7 279 aaPredicted RBP18.17■□□□□ 0.5
CAPN3-209ENST00000466222 RNF112Q9ULX5 631 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 PLEKHM1Q9Y4G2 1056 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 ME2P23368 584 aa18.16■□□□□ 0.5
CAPN3-209ENST00000466222 AQP4P55087 323 aa18.16■□□□□ 0.5
CAPN3-209ENST00000466222 SH3BGRP55822 239 aaPredicted RBP18.16■□□□□ 0.5
CAPN3-209ENST00000466222 GALNT1Q10472 559 aaPredicted RBP18.16■□□□□ 0.5
CAPN3-209ENST00000466222 ART3Q13508 389 aa18.16■□□□□ 0.5
CAPN3-209ENST00000466222 GTF2H3Q13889 308 aa18.16■□□□□ 0.5
CAPN3-209ENST00000466222 FLOT2Q14254 428 aa18.16■□□□□ 0.5
CAPN3-209ENST00000466222 NFE2L1Q14494 772 aa18.16■□□□□ 0.5
CAPN3-209ENST00000466222 PHKG1Q16816 387 aa18.16■□□□□ 0.5
CAPN3-209ENST00000466222 MMEL1Q495T6 779 aa18.16■□□□□ 0.5
CAPN3-209ENST00000466222 FAM219BQ5XKK7 198 aa18.16■□□□□ 0.5
CAPN3-209ENST00000466222 NXNQ6DKJ4 435 aa18.16■□□□□ 0.5
CAPN3-209ENST00000466222 SBSNQ6UWP8 590 aa18.16■□□□□ 0.5
CAPN3-209ENST00000466222 MYO1HQ8N1T3 1032 aa18.16■□□□□ 0.5
CAPN3-209ENST00000466222 STAG3L4Q8TBR4 150 aa18.16■□□□□ 0.5
CAPN3-209ENST00000466222 ASB12Q8WXK4 309 aa18.16■□□□□ 0.5
CAPN3-209ENST00000466222 ESAMQ96AP7 390 aa18.16■□□□□ 0.5
CAPN3-209ENST00000466222 RCN3Q96D15 328 aa18.16■□□□□ 0.5
CAPN3-209ENST00000466222 UHRF1Q96T88 793 aaPredicted RBP18.16■□□□□ 0.5
CAPN3-209ENST00000466222 MOSPD1Q9UJG1 213 aa18.16■□□□□ 0.5
CAPN3-209ENST00000466222 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.16■□□□□ 0.5
CAPN3-209ENST00000466222 ENO4A6NNW6 628 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 FPGTO14772 594 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 DENRO43583 198 aaKnown RBP18.15■□□□□ 0.5
CAPN3-209ENST00000466222 MAOBP27338 520 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 OXTRP30559 389 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 RGS4P49798 205 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 PFKFB4Q16877 469 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 C18orf21Q32NC0 220 aaPredicted RBP18.15■□□□□ 0.5
CAPN3-209ENST00000466222 TTLL9Q3SXZ7 439 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 CAMKK1Q8N5S9 505 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 TMEM145Q8NBT3 493 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 HIPK4Q8NE63 616 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 SPDYE1Q8NFV5 336 aaPredicted RBP18.15■□□□□ 0.5
CAPN3-209ENST00000466222 RHEBL1Q8TAI7 183 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 CATSPER2Q96P56 530 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 CDRT15Q96T59 188 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 ORAI3Q9BRQ5 295 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 EPHX3Q9H6B9 360 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 WDR41Q9HAD4 459 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 FGF22Q9HCT0 170 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 SPATA6Q9NWH7 488 aaPredicted RBP18.15■□□□□ 0.5
CAPN3-209ENST00000466222 SLC5A10A0PJK1 596 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 KERAO60938 352 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 SIX3O95343 332 aaPredicted RBP18.15■□□□□ 0.5
CAPN3-209ENST00000466222 ZCCHC18P0CG32 403 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 BCKDHBP21953 392 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 TEAD1P28347 426 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 PFN3P60673 137 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 ABRQ12979 859 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 PPP1R3AQ16821 1122 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 GRAMD1BQ3KR37 738 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 TJAP1Q5JTD0 557 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 FOXB2Q5VYV0 432 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 MBOAT1Q6ZNC8 495 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 CHST15Q7LFX5 561 aaPredicted RBP18.15■□□□□ 0.5
CAPN3-209ENST00000466222 SLC22A9Q8IVM8 553 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.15■□□□□ 0.5
CAPN3-209ENST00000466222 CCNYL1Q8N7R7 359 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 PHC3Q8NDX5 983 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 ADCY4Q8NFM4 1077 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 ASZ1Q8WWH4 475 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 LRGUKQ96M69 825 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 SH3GL3Q99963 347 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 NDUFA13Q9P0J0 144 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 CIDEBQ9UHD4 219 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 RAB26Q9ULW5 256 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 GPR34Q9UPC5 381 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 ST14Q9Y5Y6 855 aa18.15■□□□□ 0.5
CAPN3-209ENST00000466222 COPG1Q9Y678 874 aaKnown RBP18.15■□□□□ 0.5
CAPN3-209ENST00000466222 LRRK1Q38SD2 2015 aa18.14■□□□□ 0.5
CAPN3-209ENST00000466222 SUPT3HB4E1H0 165 aa18.14■□□□□ 0.49
CAPN3-209ENST00000466222 SDHDO14521 159 aa18.14■□□□□ 0.49
CAPN3-209ENST00000466222 SUPT3HO75486 399 aa18.14■□□□□ 0.49
CAPN3-209ENST00000466222 BCAS2O75934 225 aaPredicted RBP18.14■□□□□ 0.49
CAPN3-209ENST00000466222 SLCO2B1O94956 709 aa18.14■□□□□ 0.49
CAPN3-209ENST00000466222 GUCA1CO95843 209 aa18.14■□□□□ 0.49
CAPN3-209ENST00000466222 HSPA13P48723 471 aa18.14■□□□□ 0.49
CAPN3-209ENST00000466222 AGTR2P50052 363 aa18.14■□□□□ 0.49
CAPN3-209ENST00000466222 THOP1P52888 689 aa18.14■□□□□ 0.49
CAPN3-209ENST00000466222 TGFBIQ15582 683 aa18.14■□□□□ 0.49
CAPN3-209ENST00000466222 SYTL3Q4VX76 610 aa18.14■□□□□ 0.49
CAPN3-209ENST00000466222 LIN52Q52LA3 116 aa18.14■□□□□ 0.49
CAPN3-209ENST00000466222 PLEKHS1Q5SXH7 462 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms