RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 Q6ZSR9 355 aa16.88■□□□□ 0.29
CDK11A-209ENST00000460465 FBXO15Q8NCQ5 510 aaPredicted RBP16.88■□□□□ 0.29
CDK11A-209ENST00000460465 HMGB4Q8WW32 186 aa16.88■□□□□ 0.29
CDK11A-209ENST00000460465 RASSF4Q9H2L5 321 aa16.88■□□□□ 0.29
CDK11A-209ENST00000460465 GPR89AB7ZAQ6 455 aa16.88■□□□□ 0.29
CDK11A-209ENST00000460465 MAN2B1O00754 1011 aa16.88■□□□□ 0.29
CDK11A-209ENST00000460465 SLC16A8O95907 504 aa16.88■□□□□ 0.29
CDK11A-209ENST00000460465 GPR89BP0CG08 455 aa16.88■□□□□ 0.29
CDK11A-209ENST00000460465 ITGAXP20702 1163 aa16.88■□□□□ 0.29
CDK11A-209ENST00000460465 IMPA1P29218 277 aa16.88■□□□□ 0.29
CDK11A-209ENST00000460465 SPATA19Q7Z5L4 167 aa16.88■□□□□ 0.29
CDK11A-209ENST00000460465 PPFIBP2Q8ND30 876 aa16.88■□□□□ 0.29
CDK11A-209ENST00000460465 SPDYE1Q8NFV5 336 aaPredicted RBP16.88■□□□□ 0.29
CDK11A-209ENST00000460465 ZDHHC5Q9C0B5 715 aa16.88■□□□□ 0.29
CDK11A-209ENST00000460465 CCDC167Q9P0B6 97 aa16.88■□□□□ 0.29
CDK11A-209ENST00000460465 CA14Q9ULX7 337 aa16.88■□□□□ 0.29
CDK11A-209ENST00000460465 DNMT3AQ9Y6K1 912 aaPredicted RBP16.88■□□□□ 0.29
CDK11A-209ENST00000460465 PRUNE2Q8WUY3 3088 aa16.88■□□□□ 0.29
CDK11A-209ENST00000460465 AIM2O14862 343 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 FUCA1P04066 466 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 GPX3P22352 226 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 MLLT1Q03111 559 aaPredicted RBP16.87■□□□□ 0.29
CDK11A-209ENST00000460465 RPA4Q13156 261 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 NAE1Q13564 534 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 PAOXQ6QHF9 649 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 PDZD3Q86UT5 571 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 THOC6Q86W42 341 aaKnown RBP16.87■□□□□ 0.29
CDK11A-209ENST00000460465 ARHGAP24Q8N264 748 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 SFRP1Q8N474 314 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 OR9I1Q8NGQ6 314 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 ASB12Q8WXK4 309 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 RCN3Q96D15 328 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 MED8Q96G25 268 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 THTPAQ9BU02 230 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 APOOQ9BUR5 198 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 SLC29A3Q9BZD2 475 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 MMADHCQ9H3L0 296 aaPredicted RBP16.87■□□□□ 0.29
CDK11A-209ENST00000460465 FARSBQ9NSD9 589 aaKnown RBP16.87■□□□□ 0.29
CDK11A-209ENST00000460465 INTS7Q9NVH2 962 aaKnown RBP16.87■□□□□ 0.29
CDK11A-209ENST00000460465 DUSP12Q9UNI6 340 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.87■□□□□ 0.29
CDK11A-209ENST00000460465 NUDT2P50583 147 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 NME5P56597 212 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 ATP6AP1LQ52LC2 224 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 ZNF852Q6ZMS4 543 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 KLHDC8AQ8IYD2 350 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 GUCD1Q96NT3 240 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 PSMD13Q9UNM6 376 aa16.87■□□□□ 0.29
CDK11A-209ENST00000460465 MANBAO00462 879 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 CEACAM5P06731 702 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 CHRNB1P11230 501 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 DIO3P55073 304 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 TFF2Q03403 129 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 MAPRE2Q15555 327 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 CPSF6Q16630 551 aaKnown RBP eCLIP16.86■□□□□ 0.29
CDK11A-209ENST00000460465 GSTA3Q16772 222 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 GGTA1PQ4G0N0 100 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 C6orf136Q5SQH8 315 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 UNC5DQ6UXZ4 953 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 CHST15Q7LFX5 561 aaPredicted RBP16.86■□□□□ 0.29
CDK11A-209ENST00000460465 TRIM69Q86WT6 500 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 PARP9Q8IXQ6 854 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 MIER2Q8N344 545 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 OR56A3Q8NH54 315 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 CLPTM1LQ96KA5 538 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 C1orf50Q9BV19 199 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 BTBD1Q9H0C5 482 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 ZNF490Q9ULM2 529 aaPredicted RBP16.86■□□□□ 0.29
CDK11A-209ENST00000460465 KCNE1BA0A087WTH5 132 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 PRAMEF4O60810 478 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 ULK1O75385 1050 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 IDO1P14902 403 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 ERVK-8P63133 956 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 NR6A1Q15406 480 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 SGO1Q5FBB7 561 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 PRAMEF9Q5VWM5 478 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 METRNLQ641Q3 311 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 RNF165Q6ZSG1 346 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 DEFB107AQ8IZN7 70 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 L3MBTL4Q8NA19 623 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 OR9A1PQ8NGU1 263 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 OR2T34Q8NGX1 318 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 ZNF480Q8WV37 535 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 AIG1Q9NVV5 245 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 EBF1Q9UH73 591 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 ASF1AQ9Y294 204 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 SLC17A4Q9Y2C5 497 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 CCL27Q9Y4X3 112 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 GPR45Q9Y5Y3 372 aa16.86■□□□□ 0.29
CDK11A-209ENST00000460465 CACNB4O00305 520 aaPredicted RBP16.85■□□□□ 0.29
CDK11A-209ENST00000460465 LSM1O15116 133 aaKnown RBP16.85■□□□□ 0.29
CDK11A-209ENST00000460465 ACP5P13686 325 aa16.85■□□□□ 0.29
CDK11A-209ENST00000460465 HALP42357 657 aa16.85■□□□□ 0.29
CDK11A-209ENST00000460465 ACADVLP49748 655 aa16.85■□□□□ 0.29
CDK11A-209ENST00000460465 CLDN2P57739 230 aa16.85■□□□□ 0.29
CDK11A-209ENST00000460465 SCUBE1Q8IWY4 988 aa16.85■□□□□ 0.29
CDK11A-209ENST00000460465 PGBD3Q8N328 593 aa16.85■□□□□ 0.29
CDK11A-209ENST00000460465 FNDC5Q8NAU1 212 aa16.85■□□□□ 0.29
CDK11A-209ENST00000460465 USP7Q93009 1102 aa16.85■□□□□ 0.29
CDK11A-209ENST00000460465 OR4K3Q96R72 315 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms