RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 CCNFP41002 786 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 SKIV2L2P42285 1042 aaKnown RBP12.43□□□□□ -0.42
COL18A1-206ENST00000459895 SLC12A2P55011 1212 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 IL2P60568 153 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 RAB10P61026 200 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 USP10Q14694 798 aaKnown RBP12.43□□□□□ -0.42
COL18A1-206ENST00000459895 PHKG1Q16816 387 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 KLHL35Q6PF15 583 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 CYHR1Q6ZMK1 362 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 MBOAT1Q6ZNC8 495 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 UBE2R2Q712K3 238 aaPredicted RBP12.43□□□□□ -0.42
COL18A1-206ENST00000459895 TRIM73Q86UV7 250 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 PLXDC1Q8IUK5 500 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 CACTIN-AS1Q8N1I8 211 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 FLVCR1-AS1Q8TAF5 88 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 UBLCP1Q8WVY7 318 aaPredicted RBP12.43□□□□□ -0.42
COL18A1-206ENST00000459895 ASB11Q8WXH4 323 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.43□□□□□ -0.42
COL18A1-206ENST00000459895 NXPE2Q96DL1 559 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 TSPAN17Q96FV3 270 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 DPYSL5Q9BPU6 564 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 RAB11FIP5Q9BXF6 653 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 TMEM121BQ9BXQ6 578 aaPredicted RBP12.43□□□□□ -0.42
COL18A1-206ENST00000459895 UNKQ9C0B0 810 aaKnown RBP12.43□□□□□ -0.42
COL18A1-206ENST00000459895 TWSG1Q9GZX9 223 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 RAB33BQ9H082 229 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 GPAMQ9HCL2 828 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 SNX15Q9NRS6 342 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 HRASLS2Q9NWW9 162 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 SPHK1Q9NYA1 384 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 SPATA7Q9P0W8 599 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 MSRB2Q9Y3D2 182 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 LOXL2Q9Y4K0 774 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 UNC13CQ8NB66 2214 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 RASSF9O75901 435 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 ALDOAP04075 364 aaKnown RBP12.42□□□□□ -0.42
COL18A1-206ENST00000459895 SHBGP04278 402 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 MPOP05164 745 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 C8GP07360 202 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 UGT2B7P16662 529 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 STMN1P16949 149 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 ITIH1P19827 911 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 SERPINB8P50452 374 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 CSRP3P50461 194 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 TUBB4BP68371 445 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 GABREP78334 506 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 IRF9Q00978 393 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 ILF2Q12905 390 aaKnown RBP12.42□□□□□ -0.42
COL18A1-206ENST00000459895 SLC29A2Q14542 456 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 PPP1R3AQ16821 1122 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 MROH9Q5TGP6 573 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 FBXO38Q6PIJ6 1188 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 SBSNQ6UWP8 590 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 C2orf73Q8N5S3 287 aaPredicted RBP12.42□□□□□ -0.42
COL18A1-206ENST00000459895 FBXO15Q8NCQ5 510 aaPredicted RBP12.42□□□□□ -0.42
COL18A1-206ENST00000459895 OR2L8Q8NGY9 312 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 GATA6Q92908 595 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 PMEPA1Q969W9 287 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 RAD51AP1Q96B01 352 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 PKP4Q99569 1192 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 DHRS4Q9BTZ2 278 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 STRADBQ9C0K7 418 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 ZNF768Q9H5H4 540 aaKnown RBP12.42□□□□□ -0.42
COL18A1-206ENST00000459895 SIDT1Q9NXL6 827 aaKnown RBP12.42□□□□□ -0.42
COL18A1-206ENST00000459895 ACTR10Q9NZ32 417 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 PDP2Q9P2J9 529 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 CTNNAL1Q9UBT7 734 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 EPHA6Q9UF33 1036 aa12.42□□□□□ -0.42
COL18A1-206ENST00000459895 PIPSLA2A3N6 862 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 C2orf74A8MZ97 194 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 GFYI3L273 518 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 CDC7O00311 574 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 MATN2O00339 956 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 HGSO14964 777 aaPredicted RBP12.41□□□□□ -0.42
COL18A1-206ENST00000459895 KDM1AO60341 852 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 SLC16A8O95907 504 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 SYF2O95926 243 aaKnown RBP12.41□□□□□ -0.42
COL18A1-206ENST00000459895 PVRP15151 417 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 IMPA1P29218 277 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 HSD17B3P37058 310 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 ETV5P41161 510 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 MAGEA12P43365 314 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 LSSP48449 732 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 PRKAA1Q13131 559 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 TRA2AQ13595 282 aaKnown RBP eCLIP12.41□□□□□ -0.42
COL18A1-206ENST00000459895 FASTKQ14296 549 aaKnown RBP12.41□□□□□ -0.42
COL18A1-206ENST00000459895 ARMC6Q6NXE6 501 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 EMBQ6PCB8 327 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 FOXR1Q6PIV2 292 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 SPESP1Q6UW49 350 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 TAOK1Q7L7X3 1001 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 ARHGAP22Q7Z5H3 698 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 SPATA6LQ8N4H0 392 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 PPFIBP2Q8ND30 876 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 OR9A1PQ8NGU1 263 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 CAVIN3Q969G5 261 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 ISL2Q96A47 359 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 ZDHHC12Q96GR4 267 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 CD180Q99467 661 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 MAP3K3Q99759 626 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms