RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 SYNPO2Q9UMS6 1093 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 DIMT1Q9UNQ2 313 aaKnown RBP4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 HSPB11Q9Y547 144 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 PCDHGA9Q9Y5G4 932 aaKnown RBP4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 SHOXO15266 292 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 PRPSAP2O60256 369 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 TLR5O60602 858 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 LALBAP00709 142 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 ALBP02768 609 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 G6PDP11413 515 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 GABRB1P18505 474 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 PGAM1P18669 254 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 EEF1DP29692 281 aaKnown RBP4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 CSTF2P33240 577 aaKnown RBP eCLIP4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 CD79BP40259 229 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 MTHFRP42898 656 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 MAN2A2P49641 1150 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 ARHGDIAP52565 204 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 B2MP61769 119 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 KRT76Q01546 638 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 LRRC32Q14392 662 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 LGSNQ5TDP6 509 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 FAM171BQ6P995 826 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 SYCE2Q6PIF2 218 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 DGLUCYQ7Z3D6 616 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 ENTHD1Q8IYW4 607 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 DEFB106AQ8N104 65 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 ADPGKQ9BRR6 497 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 ZSCAN5AQ9BUG6 496 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 SARGQ9BW04 601 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 CDHR5Q9HBB8 845 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 TREX1Q9NSU2 369 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 DDX28Q9NUL7 540 aaKnown RBP4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 GPATCH2Q9NW75 528 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 SEPT10Q9P0V9 454 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 WNK2Q9Y3S1 2297 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 GBF1Q92538 1859 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 FAM95CA0A1B0GW59 222 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 KLRG2A4D1S0 409 aaPredicted RBP4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF99A8MXY4 864 aaPredicted RBP4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 H0YAE9 185 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 APOL1O14791 398 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 STAM2O75886 525 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 PDGFAP04085 211 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF37AP17032 561 aaPredicted RBP4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 NNMTP40261 264 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 ARHGDIBP52566 201 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 OR2B6P58173 313 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 SOX4Q06945 474 aaPredicted RBP4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 MELKQ14680 651 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 GRIK4Q16099 956 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 PFKFB4Q16877 469 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 FAM98CQ17RN3 349 aaKnown RBP4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 PROX2Q3B8N5 592 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF484Q5JVG2 852 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 FAM160B2Q86V87 743 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 ANKRD46Q86W74 232 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 WDR49Q8IV35 697 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 WNT2BQ93097 391 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 KCTD12Q96CX2 325 aaKnown RBP4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 TRNT1Q96Q11 434 aaKnown RBP4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 VAT1Q99536 393 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 KATNAL1Q9BW62 490 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF518BQ9C0D4 1074 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 REXO4Q9GZR2 422 aaKnown RBP4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 SRRQ9GZT4 340 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 ESRP2Q9H6T0 727 aaKnown RBP4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 SP140LQ9H930 580 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 HHATLQ9HCP6 504 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 WASH6PQ9NQA3 447 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 GPR83Q9NYM4 423 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 PCDHB5Q9Y5E4 795 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 MED13LQ71F56 2210 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 SPTAN1Q13813 2472 aaKnown RBP4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 INO80B-WBP1J3KQ70 363 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 H2AFYO75367 372 aaKnown RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 SEC22BO75396 215 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 ARHGEF15O94989 841 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 SLITRK5O94991 958 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 CSF3P09919 207 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 HAPLN1P10915 354 aaPredicted RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 LCP1P13796 627 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 FEN1P39748 380 aaKnown RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 ZXDBP98169 803 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 HMGCS1Q01581 520 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 GPR68Q15743 365 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 IGSF11Q5DX21 431 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 JADE1Q6IE81 842 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 LRFN4Q6PJG9 635 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 SUSD1Q6UWL2 747 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 HHIPL2Q6UWX4 724 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC46A3Q7Z3Q1 461 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 TECPR1Q7Z6L1 1165 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 NOXA1Q86UR1 476 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 FAM109AQ8N4B1 249 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 SVOPQ8N4V2 548 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 REPS2Q8NFH8 660 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 HERVK_113Q902F9 699 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 LPAR1Q92633 364 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms