RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 SLIT1O75093 1534 aa12.12□□□□□ -0.47
NEDD4L-208ENST00000456173 IMPDH1P20839 514 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 KELP23276 732 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 FAPQ12884 760 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 FGL2Q14314 439 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 ATAD3CQ5T2N8 411 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 METTL25Q8N6Q8 603 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 FAM98AQ8NCA5 519 aaKnown RBP12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 C1orf216Q8TAB5 229 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 ZNF70Q9UC06 446 aaPredicted RBP12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 ATF5Q9Y2D1 282 aaPredicted RBP12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 A0A1W2PP18 115 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 CASTOR2A6NHX0 329 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 OPN1SWP03999 348 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 ITPKAP23677 461 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 CASP3P42574 277 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 DBPQ10586 325 aaPredicted RBP12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 KLHL22Q53GT1 634 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 KIAA1161Q6NSJ0 714 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 MTSS1LQ765P7 747 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 POMGNT2Q8NAT1 580 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 ZSCAN1Q8NBB4 408 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 ARHGEF4Q9NR80 690 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 C9IYK1 514 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 EIF3FO00303 357 aaPredicted RBP12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 CKMT1AP12532 417 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 PRKCHP24723 683 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 ACADLP28330 430 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 RYKP34925 604 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 GMPRP36959 345 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 GJA9P57773 515 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 RFTN1Q14699 578 aaPredicted RBP12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 SPCS2Q15005 226 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 UGCGQ16739 394 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 VMACQ2NL98 169 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 SLC25A25Q6KCM7 469 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 FTMTQ8N4E7 242 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 COPS8Q99627 209 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 GBA3Q9H227 469 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 CTPS2Q9NRF8 586 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 PRORSD1PA6NEY8 169 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 SSX5O60225 188 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 C4BPAP04003 597 aaKnown RBP12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 FPR1P21462 350 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 BDNFP23560 247 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 RFC2P35250 354 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 ARF3P61204 181 aaPredicted RBP12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 ST8SIA6P61647 398 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 ARF1P84077 181 aaKnown RBP12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 GPR68Q15743 365 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 GRK1Q15835 563 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 SPATC1Q76KD6 591 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 GALNTL5Q7Z4T8 443 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 FAM217AQ8IXS0 508 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 XAGE5Q8WWM1 108 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 TCEAL4Q96EI5 215 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 COQ10AQ96MF6 247 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 PRMT8Q9NR22 394 aaPredicted RBP12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 MTMR10Q9NXD2 777 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 THUMPD1Q9NXG2 353 aaKnown RBP12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 SEC14L4Q9UDX3 406 aa12.11□□□□□ -0.47
NEDD4L-208ENST00000456173 ZC3H13Q5T200 1668 aaKnown RBP12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 TTC34A8MYJ7 566 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 TLR4O00206 839 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 FGF10O15520 208 aaPredicted RBP12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 TSPAN1O60635 241 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 CSN2P05814 226 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 GADD45AP24522 165 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 CCDC58Q4VC31 144 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 ELP2Q6IA86 826 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 PAQR7Q86WK9 346 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 PLCZ1Q86YW0 608 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 PDZD9Q8IXQ8 264 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 LGI2Q8N0V4 545 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 FAM151AQ8WW52 585 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 TMEM209Q96SK2 561 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 CCDC32Q9BV29 185 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 ATP13A3Q9H7F0 1226 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 DTLQ9NZJ0 730 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 EXTL2Q9UBQ6 330 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 TMX2Q9Y320 296 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 MEIOCA2RUB1 952 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 TMEM221A6NGB7 291 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 CLCA1A8K7I4 914 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 CREG1O75629 220 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 MC4RP32245 332 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 RAB2AP61019 212 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 HERVK_113P63132 956 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 SNTA1Q13424 505 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 ZNF782Q6ZMW2 699 aaPredicted RBP12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 ARMC10Q8N2F6 343 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 ELMOD1Q8N336 334 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 ERVK-6Q9BXR3 956 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 TRPV4Q9HBA0 871 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 RC3H2Q9HBD1 1191 aaKnown RBP12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 MS4A12Q9NXJ0 267 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 ENTPD4Q9Y227 616 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 IQCF5A8MTL0 148 aa12.1□□□□□ -0.47
NEDD4L-208ENST00000456173 C7P10643 843 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms