RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 SAMD15Q9P1V8 674 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 RNF14Q9UBS8 474 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 PCDHB3Q9Y5E6 796 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 PCDHGA6Q9Y5G7 932 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 NFS1Q9Y697 457 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 H3BMM5 538 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 C1orf105O95561 183 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 RECKO95980 971 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 PAMP19021 973 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 CD9P21926 228 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 GABRB3P28472 473 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 ATP5DP30049 168 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 ARL4DP49703 201 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 RAB28P51157 221 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 CLCN7P51798 805 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 TIAL1Q01085 375 aaKnown RBP eCLIP13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 LY6DQ14210 128 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 KIR2DS3Q14952 304 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 LONRF1Q17RB8 773 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 SLC5A12Q1EHB4 618 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 CCSMST1Q4G0I0 132 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 TAF1BQ53T94 588 aaPredicted RBP13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 TMTC4Q5T4D3 741 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 HIBCHQ6NVY1 386 aaPredicted RBP13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 CYB5D1Q6P9G0 228 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 CYHR1Q6ZMK1 362 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 OTOAQ7RTW8 1153 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 TRIM73Q86UV7 250 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 DCUN1D3Q8IWE4 304 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 KLHL7Q8IXQ5 586 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 LMNTD2Q8IXW0 634 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 ZNF843Q8N446 348 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 DNAJC22Q8N4W6 341 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 CFAP61Q8NHU2 1237 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 STAMBPL1Q96FJ0 436 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 LRFN5Q96NI6 719 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 IL17FQ96PD4 163 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 WDR83Q9BRX9 315 aaKnown RBP13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 EFHD1Q9BUP0 239 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 KLHL25Q9H0H3 589 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 LHX9Q9NQ69 397 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 KLHL42Q9P2K6 505 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 ASIC3Q9UHC3 531 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 LNPEPQ9UIQ6 1025 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 CROTQ9UKG9 612 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 MAD1L1Q9Y6D9 718 aa13.59□□□□□ -0.23
RTFDC1-204ENST00000449062 NBASA2RRP1 2371 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 ZNF891A8MT65 544 aaPredicted RBP13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 PFDN6O15212 129 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 BANF1O75531 89 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 HAUS5O94927 633 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 MT-ND3P03897 115 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 RORAP35398 523 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 DHX9Q08211 1270 aaKnown RBP13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 GPS2Q13227 327 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 TMED2Q15363 201 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 HSP90AA5PQ58FG0 334 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 ACSBG2Q5FVE4 666 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 IZUMO3Q5VZ72 239 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 ZNF470Q6ECI4 717 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 LCN10Q6JVE6 187 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 FAM199XQ6PEV8 388 aaPredicted RBP13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 PCGF5Q86SE9 256 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 C17orf53Q8N3J3 647 aaPredicted RBP13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 OR2L8Q8NGY9 312 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 GIMAP7Q8NHV1 300 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 HMGCLL1Q8TB92 370 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 DENND1AQ8TEH3 1009 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 KIAA1143Q96AT1 154 aaPredicted RBP13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 MED8Q96G25 268 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 TCTN2Q96GX1 697 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 PWWP2AQ96N64 755 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 FBXO6Q9NRD1 293 aaPredicted RBP13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 C20orf96Q9NUD7 363 aaPredicted RBP13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 CIDEBQ9UHD4 219 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 FBXO5Q9UKT4 447 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 RUVBL2Q9Y230 463 aaKnown RBP13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 VPS9D1Q9Y2B5 631 aa13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 MRPS18BQ9Y676 258 aaKnown RBP13.58□□□□□ -0.24
RTFDC1-204ENST00000449062 SNRNP200O75643 2136 aaKnown RBP13.57□□□□□ -0.24
RTFDC1-204ENST00000449062 MYO18BQ8IUG5 2567 aa13.57□□□□□ -0.24
RTFDC1-204ENST00000449062 A0A0J9YY10 115 aa13.57□□□□□ -0.24
RTFDC1-204ENST00000449062 KRT87PA6NCN2 255 aa13.57□□□□□ -0.24
RTFDC1-204ENST00000449062 CCDC188H7C350 402 aa13.57□□□□□ -0.24
RTFDC1-204ENST00000449062 RASGRF2O14827 1237 aa13.57□□□□□ -0.24
RTFDC1-204ENST00000449062 TTI1O43156 1089 aa13.57□□□□□ -0.24
RTFDC1-204ENST00000449062 SCRG1O75711 98 aa13.57□□□□□ -0.24
RTFDC1-204ENST00000449062 RPN2P04844 631 aa13.57□□□□□ -0.24
RTFDC1-204ENST00000449062 CAPN1P07384 714 aa13.57□□□□□ -0.24
RTFDC1-204ENST00000449062 CTSBP07858 339 aa13.57□□□□□ -0.24
RTFDC1-204ENST00000449062 CCNYL3P0C7X3 344 aa13.57□□□□□ -0.24
RTFDC1-204ENST00000449062 PGAM1P18669 254 aa13.57□□□□□ -0.24
RTFDC1-204ENST00000449062 CHRM3P20309 590 aa13.57□□□□□ -0.24
RTFDC1-204ENST00000449062 OAS2P29728 719 aaKnown RBP13.57□□□□□ -0.24
RTFDC1-204ENST00000449062 DLSTP36957 453 aa13.57□□□□□ -0.24
RTFDC1-204ENST00000449062 SLC1A2P43004 574 aa13.57□□□□□ -0.24
RTFDC1-204ENST00000449062 DR1Q01658 176 aa13.57□□□□□ -0.24
RTFDC1-204ENST00000449062 THOC5Q13769 683 aaKnown RBP13.57□□□□□ -0.24
RTFDC1-204ENST00000449062 CRYMQ14894 314 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms