RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 TAF1CQ15572 869 aaPredicted RBP13.36□□□□□ -0.27
POLR1B-209ENST00000448770 TRIM16LQ309B1 348 aa13.36□□□□□ -0.27
POLR1B-209ENST00000448770 CATSPEREQ5SY80 951 aa13.36□□□□□ -0.27
POLR1B-209ENST00000448770 CPZQ66K79 652 aa13.36□□□□□ -0.27
POLR1B-209ENST00000448770 DSG4Q86SJ6 1040 aa13.36□□□□□ -0.27
POLR1B-209ENST00000448770 ADAMTSL2Q86TH1 951 aa13.36□□□□□ -0.27
POLR1B-209ENST00000448770 CCDC71Q8IV32 467 aaPredicted RBP13.36□□□□□ -0.27
POLR1B-209ENST00000448770 ARL10Q8N8L6 244 aa13.36□□□□□ -0.27
POLR1B-209ENST00000448770 OR6K2Q8NGY2 324 aa13.36□□□□□ -0.27
POLR1B-209ENST00000448770 TRIB2Q92519 343 aa13.36□□□□□ -0.27
POLR1B-209ENST00000448770 ABCG8Q9H221 673 aa13.36□□□□□ -0.27
POLR1B-209ENST00000448770 POLE4Q9NR33 117 aa13.36□□□□□ -0.27
POLR1B-209ENST00000448770 SACM1LQ9NTJ5 587 aa13.36□□□□□ -0.27
POLR1B-209ENST00000448770 GPRC5BQ9NZH0 403 aa13.36□□□□□ -0.27
POLR1B-209ENST00000448770 LHX3Q9UBR4 397 aa13.36□□□□□ -0.27
POLR1B-209ENST00000448770 ZNF490Q9ULM2 529 aaPredicted RBP13.36□□□□□ -0.27
POLR1B-209ENST00000448770 PCDHB9Q9Y5E1 797 aa13.36□□□□□ -0.27
POLR1B-209ENST00000448770 COMMD10Q9Y6G5 202 aa13.36□□□□□ -0.27
POLR1B-209ENST00000448770 IFRD1O00458 451 aaPredicted RBP13.35□□□□□ -0.27
POLR1B-209ENST00000448770 ADAM12O43184 909 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 COQ9O75208 318 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 SEC22BO75396 215 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 SCELO95171 688 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 PARNO95453 639 aaKnown RBP13.35□□□□□ -0.27
POLR1B-209ENST00000448770 ANGPTL1O95841 491 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 RHOCP08134 193 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 DNASE1L3Q13609 305 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 INAVAQ3KP66 663 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 RTP2Q5QGT7 225 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 NCEH1Q6PIU2 408 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 C17orf99Q6UX52 265 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 SERPINA9Q86WD7 417 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 TMEM173Q86WV6 379 aaPredicted RBP13.35□□□□□ -0.27
POLR1B-209ENST00000448770 EID3Q8N140 333 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 YIPF6Q96EC8 236 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 ACPTQ9BZG2 426 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 TRIT1Q9H3H1 467 aaKnown RBP13.35□□□□□ -0.27
POLR1B-209ENST00000448770 LRTM1Q9HBL6 345 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 C3orf18Q9UK00 162 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 PAIP2BQ9ULR5 123 aaKnown RBP13.35□□□□□ -0.27
POLR1B-209ENST00000448770 ERVK-11Q9UQG0 969 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 VPS9D1Q9Y2B5 631 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 SNX5Q9Y5X3 404 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 TRIM43BA6NCK2 446 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 MANBAO00462 879 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 GMNNO75496 209 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 MT-ND2P03891 347 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 RETP07949 1114 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 MSH3P20585 1137 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 PAX3P23760 479 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 MZF1P28698 734 aaPredicted RBP13.35□□□□□ -0.27
POLR1B-209ENST00000448770 RYKP34925 604 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 SLC35A2P78381 396 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 TWF1Q12792 350 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 ZNF846Q147U1 533 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 RNF219Q5W0B1 726 aaPredicted RBP13.35□□□□□ -0.27
POLR1B-209ENST00000448770 AADATQ8N5Z0 425 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 OR52E4Q8NGH9 312 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 SLC35B4Q969S0 331 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 PYCR2Q96C36 320 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 EGLN2Q96KS0 407 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 ZNF300Q96RE9 604 aaPredicted RBP13.35□□□□□ -0.27
POLR1B-209ENST00000448770 C1orf109Q9NX04 203 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 MARCH5Q9NX47 278 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 EIF3LQ9Y262 564 aaKnown RBP13.35□□□□□ -0.27
POLR1B-209ENST00000448770 FCF1Q9Y324 198 aaKnown RBP13.35□□□□□ -0.27
POLR1B-209ENST00000448770 OARD1Q9Y530 152 aa13.35□□□□□ -0.27
POLR1B-209ENST00000448770 TNPO3Q9Y5L0 923 aaKnown RBP13.35□□□□□ -0.27
POLR1B-209ENST00000448770 FAM220BPB1ANY3 271 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 NT5C1B-RDH14C9J2C7 533 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 H0Y626 953 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 K7ERQ8 282 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 RAD51BO15315 384 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 FZD6O60353 706 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 TRIM16O95361 564 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 TGM1P22735 817 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 HOXA9P31269 272 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 GNPDA1P46926 289 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 CACNG1Q06432 222 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 DGCR6Q14129 220 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 KCNA10Q16322 511 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 TRAF7Q6Q0C0 670 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 TAS1R1Q7RTX1 841 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 TRIM46Q7Z4K8 759 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 ADHFE1Q8IWW8 467 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 ADGRG2Q8IZP9 1017 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 RNF175Q8N4F7 328 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 ZNF566Q969W8 418 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 ZNF641Q96N77 438 aaPredicted RBP13.34□□□□□ -0.27
POLR1B-209ENST00000448770 ZBTB18Q99592 522 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 EGFL8Q99944 293 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 HERC2P3Q9BVR0 1158 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 CD244Q9BZW8 370 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 ARHGAP39Q9C0H5 1083 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 RIBC2Q9H4K1 309 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 SIRT5Q9NXA8 310 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 SLC38A8A6NNN8 435 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 AQP9O43315 295 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 RGS14O43566 566 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 SLC25A14O95258 325 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms