RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 IFI30P13284 250 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 CYP2B6P20813 491 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 KCNA5P22460 613 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 OLR1P78380 273 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 S100A12P80511 92 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 MAD2L1BPQ15013 274 aaPredicted RBP18.79■□□□□ 0.6
HMGA1-205ENST00000447654 PAGE3Q5JUK9 113 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 ZNF678Q5SXM1 525 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 LCLAT1Q6UWP7 414 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 CDH24Q86UP0 819 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 SLC47A1Q96FL8 570 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 C1orf74Q96LT6 269 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 TMEM74Q96NL1 305 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 C11orf84Q9BUA3 381 aaPredicted RBP18.79■□□□□ 0.6
HMGA1-205ENST00000447654 CYP4F12Q9HCS2 524 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 ERVK13-1Q9NX77 482 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 ELF5Q9UKW6 265 aaPredicted RBP18.79■□□□□ 0.6
HMGA1-205ENST00000447654 A8MX80 341 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 MFSD11O43934 449 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 SEC22BO75396 215 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 F2P00734 622 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 C1RP00736 705 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 MSH3P20585 1137 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 AKAP5P24588 427 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 TAS2R39P59534 338 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 TEKQ02763 1124 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 RGS1Q08116 209 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 FOXD4Q12950 439 aaPredicted RBP18.78■□□□□ 0.6
HMGA1-205ENST00000447654 TIGD6Q17RP2 521 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 MORN1Q5T089 497 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 CERCAMQ5T4B2 595 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 PPP1R26Q5T8A7 1209 aaPredicted RBP18.78■□□□□ 0.6
HMGA1-205ENST00000447654 KANK2Q63ZY3 851 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 RAB44Q7Z6P3 723 aaPredicted RBP18.78■□□□□ 0.6
HMGA1-205ENST00000447654 FRS2Q8WU20 508 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 TWIST2Q8WVJ9 160 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 ASB15Q8WXK1 588 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 REPS1Q96D71 796 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 HYLS1Q96M11 299 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 WDFY2Q96P53 400 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 BRINP2Q9C0B6 783 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 EXD2Q9NVH0 621 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 AIG1Q9NVV5 245 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 ZIM2Q9NZV7 527 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 KLHL8Q9P2G9 620 aaPredicted RBP18.78■□□□□ 0.6
HMGA1-205ENST00000447654 SRRDQ9UH36 339 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 FNDC1Q4ZHG4 1894 aaPredicted RBP18.78■□□□□ 0.6
HMGA1-205ENST00000447654 E5RI56 91 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 I3L521 148 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 AZIN1O14977 448 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 PSMD3O43242 534 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 KPNA6O60684 536 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 PAPSS2O95340 614 aaPredicted RBP18.78■□□□□ 0.6
HMGA1-205ENST00000447654 IGFBP5P24593 272 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 NMBRP28336 390 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 CPT1AP50416 773 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 HYAL2Q12891 473 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 GRB7Q14451 532 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 GBX1Q14549 363 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 ZBTB6Q15916 424 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 TIMM50Q3ZCQ8 353 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.78■□□□□ 0.6
HMGA1-205ENST00000447654 RNF39Q9H2S5 420 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 ACTR8Q9H981 624 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 TRHDEQ9UKU6 1024 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 PCDHB5Q9Y5E4 795 aa18.78■□□□□ 0.6
HMGA1-205ENST00000447654 A0A0U1RQS6 177 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 FAM234BA2RU67 622 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 B4DXG7 233 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 H3BUI4 141 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 IFRD1O00458 451 aaPredicted RBP18.77■□□□□ 0.6
HMGA1-205ENST00000447654 ANKRD28O15084 1053 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 PI15O43692 258 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 SCO1O75880 301 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 MT-CO1P00395 513 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 CCNYL3P0C7X3 344 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 ZNF865P0CJ78 1059 aaPredicted RBP18.77■□□□□ 0.6
HMGA1-205ENST00000447654 HGFP14210 728 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 TNNI3P19429 210 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 TNFSF8P32971 234 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 SOX9P48436 509 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 APLP1P51693 650 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.77■□□□□ 0.6
HMGA1-205ENST00000447654 CDH17Q12864 832 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 KCNC3Q14003 757 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 ZNF460Q14592 562 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 SLC14A2Q15849 920 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 SYT16Q17RD7 645 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 MLIPQ5VWP3 458 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 LAMTOR1Q6IAA8 161 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 SHQ1Q6PI26 577 aaKnown RBP18.77■□□□□ 0.6
HMGA1-205ENST00000447654 BRAT1Q6PJG6 821 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 ACOT1Q86TX2 421 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 OR8J3Q8NGG0 315 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 DNAJB3Q8WWF6 145 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 TSPAN17Q96FV3 270 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 ACOX2Q99424 681 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 SPATA9Q9BWV2 254 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 TRIM8Q9BZR9 551 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 SERHL2Q9H4I8 314 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms