RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 HEPHQ9BQS7 1158 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 AGXT2Q9BYV1 514 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 REG4Q9BYZ8 158 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 PITHD1Q9GZP4 211 aaPredicted RBP4.78□□□□□ -1.64
SDCBP-205ENST00000447267 PCIF1Q9H4Z3 704 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 ZMAT4Q9H898 229 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 KCMF1Q9P0J7 381 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 C11orf21Q9P2W6 132 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 NOCTQ9UK39 431 aaKnown RBP4.78□□□□□ -1.64
SDCBP-205ENST00000447267 VPS28Q9UK41 221 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 WBP11Q9Y2W2 641 aaKnown RBP4.78□□□□□ -1.64
SDCBP-205ENST00000447267 PTRH2Q9Y3E5 179 aaKnown RBP4.78□□□□□ -1.64
SDCBP-205ENST00000447267 ARID1AO14497 2285 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 ABCA1O95477 2261 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 C17orf113A0A1B0GUU1 675 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 E7ENQ6 273 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 H0YCG3 227 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 H2AFYO75367 372 aaKnown RBP4.77□□□□□ -1.65
SDCBP-205ENST00000447267 PMPCBO75439 489 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 CDKL5O76039 1030 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 LCA5LO95447 670 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 SRD5A1P18405 259 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 NELFEP18615 380 aaKnown RBP4.77□□□□□ -1.65
SDCBP-205ENST00000447267 NR4A1P22736 598 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 ZFP36P26651 326 aaKnown RBP4.77□□□□□ -1.65
SDCBP-205ENST00000447267 SOX5P35711 763 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 FASLGP48023 281 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 TBX4P57082 545 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 NUP107P57740 925 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 KIAA1024LP59773 190 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 NUCB2P80303 420 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 SLC12A1Q13621 1099 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 NCF4Q15080 339 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 ZRSR1Q15695 479 aaKnown RBP4.77□□□□□ -1.65
SDCBP-205ENST00000447267 ELAVL1Q15717 326 aaKnown RBP4.77□□□□□ -1.65
SDCBP-205ENST00000447267 INAQ16352 499 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 CYP2A13Q16696 494 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 FLYWCH1Q4VC44 716 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 KRTCAP3Q53RY4 240 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 VAX1Q5SQQ9 334 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 BSPRYQ5W0U4 402 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 TIGD7Q6NT04 549 aaPredicted RBP4.77□□□□□ -1.65
SDCBP-205ENST00000447267 C22orf39Q6P5X5 142 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 STRADAQ7RTN6 431 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 BHLHA9Q7RTU4 235 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 UNC45BQ8IWX7 931 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 ARHGAP18Q8N392 663 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 SFRP1Q8N474 314 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 SIDT2Q8NBJ9 832 aaKnown RBP4.77□□□□□ -1.65
SDCBP-205ENST00000447267 PPP1R14CQ8TAE6 165 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 LINC01560Q8TB33 94 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 FAM222BQ8WU58 562 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 GCDHQ92947 438 aaPredicted RBP4.77□□□□□ -1.65
SDCBP-205ENST00000447267 PIGTQ969N2 578 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 GFM2Q969S9 779 aaKnown RBP4.77□□□□□ -1.65
SDCBP-205ENST00000447267 RAB7BQ96AH8 199 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 CYFIP2Q96F07 1278 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 IP6K3Q96PC2 410 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 PSMB7Q99436 277 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 PIP5K1AQ99755 562 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 ULBP1Q9BZM6 244 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 SHARPINQ9H0F6 387 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 AURKAIP1Q9NWT8 199 aaPredicted RBP4.77□□□□□ -1.65
SDCBP-205ENST00000447267 GAR1Q9NY12 217 aaKnown RBP4.77□□□□□ -1.65
SDCBP-205ENST00000447267 FBXL4Q9UKA2 621 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 SUFUQ9UMX1 484 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 OR51B4Q9Y5P0 310 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 ACTL7AQ9Y615 435 aa4.77□□□□□ -1.65
SDCBP-205ENST00000447267 UBR4Q5T4S7 5183 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 VWFP04275 2813 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 A0A0A6YYJ9 748 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 IGHV5-51A0A0C4DH38 117 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 DYTNA2CJ06 578 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 YJEFN3A6XGL0 299 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 CLCA1A8K7I4 914 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 ASNA1O43681 348 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 FAM20BO75063 409 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 SOX30O94993 753 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 ZRANB2O95218 330 aaKnown RBP eCLIP4.76□□□□□ -1.65
SDCBP-205ENST00000447267 IGLV3-27P01718 113 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 IGHEP01854 428 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 UGT2B4P06133 528 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 VSIG10L2P0DP72 767 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 AMD1P17707 334 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 GJB2P29033 226 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 DDIT3P35638 169 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 PTH2RP49190 550 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 TKTL1P51854 596 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 CCNHP51946 323 aaPredicted RBP4.76□□□□□ -1.65
SDCBP-205ENST00000447267 EVCP57679 992 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 GSDMDP57764 484 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 SESN2P58004 480 aaPredicted RBP4.76□□□□□ -1.65
SDCBP-205ENST00000447267 PPP1CAP62136 330 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 GTF2BQ00403 316 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 MTM1Q13496 603 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 FAM214AQ32MH5 1076 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 GAGE13Q4V321 117 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 CARD16Q5EG05 197 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 C6orf52Q5T4I8 152 aa4.76□□□□□ -1.65
SDCBP-205ENST00000447267 IRAK1BP1Q5VVH5 260 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms