RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 XPO4Q9C0E2 1151 aaKnown RBP4.5□□□□□ -1.69
LINC00440-201ENST00000446579 LRMDAQ9H2I8 198 aa4.5□□□□□ -1.69
LINC00440-201ENST00000446579 MINDY3Q9H8M7 445 aa4.5□□□□□ -1.69
LINC00440-201ENST00000446579 DNAJC4Q9NNZ3 241 aa4.5□□□□□ -1.69
LINC00440-201ENST00000446579 TCP11L1Q9NUJ3 509 aa4.5□□□□□ -1.69
LINC00440-201ENST00000446579 MIOSQ9NXC5 875 aa4.5□□□□□ -1.69
LINC00440-201ENST00000446579 ZNF224Q9NZL3 707 aa4.5□□□□□ -1.69
LINC00440-201ENST00000446579 LRWD1Q9UFC0 647 aa4.5□□□□□ -1.69
LINC00440-201ENST00000446579 ABCC9O60706 1549 aa4.5□□□□□ -1.69
LINC00440-201ENST00000446579 MED19A0JLT2 244 aaPredicted RBP4.49□□□□□ -1.69
LINC00440-201ENST00000446579 C19orf81C9J6K1 198 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 EIF3DO15371 548 aaKnown RBP eCLIP4.49□□□□□ -1.69
LINC00440-201ENST00000446579 ST8SIA3O43173 380 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 SMAD6O43541 496 aaKnown RBP4.49□□□□□ -1.69
LINC00440-201ENST00000446579 KCNJ13O60928 360 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 BMP10O95393 424 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 CLDN14O95500 239 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 LINC00271P0C7V0 271 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 FAM106CPP0CH98 169 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 UROSP10746 265 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 MYOD1P15172 320 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 SLC6A6P31641 620 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 MMP15P51511 669 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 KIAA1024LP59773 190 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 NANOS2P60321 138 aaKnown RBP4.49□□□□□ -1.69
LINC00440-201ENST00000446579 TEFQ10587 303 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 TRAF2Q12933 501 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 RPS6KA1Q15418 735 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 NPTX1Q15818 432 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 CALCRLQ16602 461 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 PARP10Q53GL7 1025 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 XKR9Q5GH70 373 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 CCDC158Q5M9N0 1113 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 CNSTQ6PJW8 725 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 TMEM270Q6UE05 265 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 GFRALQ6UXV0 394 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 BTN2A1Q7KYR7 527 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 NUP54Q7Z3B4 507 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 TMPRSS12Q86WS5 348 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 LMNTD2Q8IXW0 634 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 CPSF7Q8N684 471 aaKnown RBP4.49□□□□□ -1.69
LINC00440-201ENST00000446579 ANKRD13CQ8N6S4 541 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 BMPERQ8N8U9 685 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 L3MBTL4Q8NA19 623 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 ZNF114Q8NC26 417 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 PPFIBP2Q8ND30 876 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 TMEM255BQ8WV15 326 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 SSMEM1Q8WWF3 244 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 BCL2L2Q92843 193 aaPredicted RBP4.49□□□□□ -1.69
LINC00440-201ENST00000446579 DAZLQ92904 295 aaKnown RBP4.49□□□□□ -1.69
LINC00440-201ENST00000446579 RIT1Q92963 219 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 THOC3Q96J01 351 aaKnown RBP4.49□□□□□ -1.69
LINC00440-201ENST00000446579 C3orf30Q96M34 536 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 MYADMQ96S97 322 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 HNRNPABQ99729 332 aaKnown RBP4.49□□□□□ -1.69
LINC00440-201ENST00000446579 GTPBP2Q9BX10 602 aaKnown RBP4.49□□□□□ -1.69
LINC00440-201ENST00000446579 SLC5A7Q9GZV3 580 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 ACKR4Q9NPB9 350 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 SERINC1Q9NRX5 453 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 HIF1ANQ9NWT6 349 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 SLCO1C1Q9NYB5 712 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 SMARCAL1Q9NZC9 954 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 SIX4Q9UIU6 781 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 HEG1Q9ULI3 1381 aa4.49□□□□□ -1.69
LINC00440-201ENST00000446579 PDS5AQ29RF7 1337 aaKnown RBP4.48□□□□□ -1.69
LINC00440-201ENST00000446579 TTC3P53804 2025 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 TEX13DA0A0J9YY54 714 aaPredicted RBP4.48□□□□□ -1.69
LINC00440-201ENST00000446579 HYKKA2RU49 373 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 LINC01553A4QN01 128 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 C5orf60A6NFR6 353 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 PRR23D1E9PI22 279 aaPredicted RBP4.48□□□□□ -1.69
LINC00440-201ENST00000446579 PGRMC2O15173 223 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 RNASEH1O60930 286 aaKnown RBP4.48□□□□□ -1.69
LINC00440-201ENST00000446579 LDB3O75112 727 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 KDM4BO94953 1096 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 GLUD1P00367 558 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 PRR23D2P0DMB1 279 aaPredicted RBP4.48□□□□□ -1.69
LINC00440-201ENST00000446579 CSF2RAP15509 400 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 POLR2CP19387 275 aaPredicted RBP4.48□□□□□ -1.69
LINC00440-201ENST00000446579 PSMB4P28070 264 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 HSD17B3P37058 310 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 TMPOP42166 694 aaKnown RBP4.48□□□□□ -1.69
LINC00440-201ENST00000446579 GLUD2P49448 558 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 ZNF131P52739 623 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 TPD52P55327 224 aaPredicted RBP4.48□□□□□ -1.69
LINC00440-201ENST00000446579 STARD6P59095 220 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 NFATC4Q14934 902 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 TAZQ16635 292 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 TMEM35AQ53FP2 167 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 MDH1BQ5I0G3 518 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 LRRC73Q5JTD7 316 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 CASC4Q6P4E1 433 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 ASB18Q6ZVZ8 466 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 PLEKHM3Q6ZWE6 761 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 KCTD9Q7L273 389 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 CATSPER4Q7RTX7 472 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 CNTN4Q8IWV2 1026 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 CLIP4Q8N3C7 705 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 GBGT1Q8N5D6 347 aa4.48□□□□□ -1.69
LINC00440-201ENST00000446579 TRIML1Q8N9V2 468 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms