RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 SLAMF1Q13291 335 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 TRAF7Q6Q0C0 670 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 TUBA1AQ71U36 451 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 ARRDC4Q8NCT1 418 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 PDLIM5Q96HC4 596 aaKnown RBP13.66□□□□□ -0.22
VPS52-212ENST00000445902 CEP295NLQ96MC4 621 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 FYTTD1Q96QD9 318 aaKnown RBP13.66□□□□□ -0.22
VPS52-212ENST00000445902 SDHCQ99643 169 aaPredicted RBP13.66□□□□□ -0.22
VPS52-212ENST00000445902 ROGDIQ9GZN7 287 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 BTBD3Q9Y2F9 522 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 PAPPA2Q9BXP8 1791 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 H3BQ06 376 aaPredicted RBP13.66□□□□□ -0.22
VPS52-212ENST00000445902 ARNTLO00327 626 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 GABRDO14764 452 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 SEMA3DO95025 777 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 C1QCP02747 245 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 HOXA9P31269 272 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 SLC15A1P46059 708 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 GPLD1P80108 840 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 IRF3Q14653 427 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 TTLL4Q14679 1199 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 SMU1Q2TAY7 513 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 MARCH8Q5T0T0 291 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 TIGD7Q6NT04 549 aaPredicted RBP13.66□□□□□ -0.22
VPS52-212ENST00000445902 NOTUMQ6P988 496 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 AADATQ8N5Z0 425 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 SIDT2Q8NBJ9 832 aaKnown RBP13.66□□□□□ -0.22
VPS52-212ENST00000445902 FAM120BQ96EK7 910 aaKnown RBP13.66□□□□□ -0.22
VPS52-212ENST00000445902 CATSPERBQ9H7T0 1116 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 ARNT2Q9HBZ2 717 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 ANKHQ9HCJ1 492 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 TBC1D24Q9ULP9 559 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 MED16Q9Y2X0 877 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 GJA3Q9Y6H8 435 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 E2F3O00716 465 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 SCELO95171 688 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 PNPLA4P41247 253 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 P2RX3P56373 397 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 DAB2P98082 770 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 HMGCS1Q01581 520 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 CACNB2Q08289 660 aaPredicted RBP13.65□□□□□ -0.22
VPS52-212ENST00000445902 MADCAM1Q13477 382 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 TAB1Q15750 504 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 GRIK4Q16099 956 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 GPR153Q6NV75 609 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 RGMBQ6NW40 437 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 SHQ1Q6PI26 577 aaKnown RBP13.65□□□□□ -0.22
VPS52-212ENST00000445902 ZNF517Q6ZMY9 492 aaPredicted RBP13.65□□□□□ -0.22
VPS52-212ENST00000445902 OR4L1Q8NH43 312 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 HCAR2Q8TDS4 363 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 APH1BQ8WW43 257 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 HMCESQ96FZ2 354 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 SP110Q9HB58 689 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 ATP13A1Q9HD20 1204 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 RANGRFQ9HD47 186 aaPredicted RBP13.65□□□□□ -0.22
VPS52-212ENST00000445902 RPRD1BQ9NQG5 326 aaKnown RBP13.65□□□□□ -0.22
VPS52-212ENST00000445902 HEBP1Q9NRV9 189 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 KRT84Q9NSB2 600 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 COMMD10Q9Y6G5 202 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 ANKRD36A6QL64 1941 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 NIPSNAP2O75323 286 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 AKT1P31749 480 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 PRKCDQ05655 676 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 ARHGAP1Q07960 439 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 ZC3H12BQ5HYM0 836 aaKnown RBP13.65□□□□□ -0.22
VPS52-212ENST00000445902 MARC1Q5VT66 337 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 EFL1Q7Z2Z2 1120 aaKnown RBP13.65□□□□□ -0.22
VPS52-212ENST00000445902 ZNF438Q7Z4V0 828 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 GPR149Q86SP6 731 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 C11orf74Q86VG3 221 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 ELMOD2Q8IZ81 293 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 PSMG2Q969U7 264 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 PYURFQ96I23 114 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 CEP19Q96LK0 163 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 NECTIN4Q96NY8 510 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 SMIM14Q96QK8 99 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 PHOX2BQ99453 314 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 BBS2Q9BXC9 721 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 ABCG8Q9H221 673 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 MMP28Q9H239 520 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 CCNB1IP1Q9NPC3 277 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 SIRT5Q9NXA8 310 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 TAS2R16Q9NYV7 291 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 TAS2R13Q9NYV9 303 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 ZNF451Q9Y4E5 1061 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 GOLGA8CPA6NN73 597 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 EVPLLA8MZ36 301 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 MEN1O00255 615 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 AREL1O15033 823 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 PER2O15055 1255 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 RGS5O15539 181 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 SLC19A1P41440 591 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 STC1P52823 247 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 RPP38P78345 283 aaKnown RBP13.65□□□□□ -0.22
VPS52-212ENST00000445902 ZMAT1Q5H9K5 638 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 VTCN1Q7Z7D3 282 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 P3H2Q8IVL5 708 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 PEX5LQ8IYB4 626 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 EEF1AKMT1Q8WVE0 214 aa13.65□□□□□ -0.22
VPS52-212ENST00000445902 JPH3Q8WXH2 748 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms