RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 BBS9Q3SYG4 887 aa16.22■□□□□ 0.19
TSPAN9-204ENST00000444315 PLEKHS1Q5SXH7 462 aa16.22■□□□□ 0.19
TSPAN9-204ENST00000444315 ZBTB2Q8N680 514 aa16.22■□□□□ 0.19
TSPAN9-204ENST00000444315 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.22■□□□□ 0.19
TSPAN9-204ENST00000444315 CT55Q8WUE5 264 aa16.22■□□□□ 0.19
TSPAN9-204ENST00000444315 SLC22A18Q96BI1 424 aa16.22■□□□□ 0.19
TSPAN9-204ENST00000444315 MED8Q96G25 268 aa16.22■□□□□ 0.19
TSPAN9-204ENST00000444315 TRAPPC9Q96Q05 1148 aa16.22■□□□□ 0.19
TSPAN9-204ENST00000444315 TRIM56Q9BRZ2 755 aaKnown RBP16.22■□□□□ 0.19
TSPAN9-204ENST00000444315 FAM167BQ9BTA0 163 aa16.22■□□□□ 0.19
TSPAN9-204ENST00000444315 TWSG1Q9GZX9 223 aa16.22■□□□□ 0.19
TSPAN9-204ENST00000444315 P2RY12Q9H244 342 aa16.22■□□□□ 0.19
TSPAN9-204ENST00000444315 ACTR5Q9H9F9 607 aaPredicted RBP16.22■□□□□ 0.19
TSPAN9-204ENST00000444315 LHX9Q9NQ69 397 aa16.22■□□□□ 0.19
TSPAN9-204ENST00000444315 FBXO6Q9NRD1 293 aaPredicted RBP16.22■□□□□ 0.19
TSPAN9-204ENST00000444315 INTS7Q9NVH2 962 aaKnown RBP16.22■□□□□ 0.19
TSPAN9-204ENST00000444315 INTS10Q9NVR2 710 aaKnown RBP16.22■□□□□ 0.19
TSPAN9-204ENST00000444315 SEMA5BQ9P283 1151 aa16.22■□□□□ 0.19
TSPAN9-204ENST00000444315 USP1O94782 785 aa16.21■□□□□ 0.19
TSPAN9-204ENST00000444315 SFTPCP11686 197 aa16.21■□□□□ 0.19
TSPAN9-204ENST00000444315 PKMP14618 531 aaKnown RBP16.21■□□□□ 0.19
TSPAN9-204ENST00000444315 PKLRP30613 574 aa16.21■□□□□ 0.19
TSPAN9-204ENST00000444315 CCNFP41002 786 aa16.21■□□□□ 0.19
TSPAN9-204ENST00000444315 KIR2DS3Q14952 304 aa16.21■□□□□ 0.19
TSPAN9-204ENST00000444315 TYSND1Q2T9J0 566 aa16.21■□□□□ 0.19
TSPAN9-204ENST00000444315 DEFB110Q30KQ9 67 aa16.21■□□□□ 0.19
TSPAN9-204ENST00000444315 CTSL3PQ5NE16 218 aa16.21■□□□□ 0.19
TSPAN9-204ENST00000444315 CILP2Q8IUL8 1156 aa16.21■□□□□ 0.19
TSPAN9-204ENST00000444315 NAT8LQ8N9F0 302 aa16.21■□□□□ 0.19
TSPAN9-204ENST00000444315 LPGAT1Q92604 370 aa16.21■□□□□ 0.19
TSPAN9-204ENST00000444315 RAD51AP1Q96B01 352 aa16.21■□□□□ 0.19
TSPAN9-204ENST00000444315 ZNF501Q96CX3 271 aaPredicted RBP16.21■□□□□ 0.19
TSPAN9-204ENST00000444315 TCTN2Q96GX1 697 aa16.21■□□□□ 0.19
TSPAN9-204ENST00000444315 PDLIM2Q96JY6 352 aa16.21■□□□□ 0.19
TSPAN9-204ENST00000444315 IL17FQ96PD4 163 aa16.21■□□□□ 0.19
TSPAN9-204ENST00000444315 SLC12A9Q9BXP2 914 aa16.21■□□□□ 0.19
TSPAN9-204ENST00000444315 TRIM31Q9BZY9 425 aa16.21■□□□□ 0.19
TSPAN9-204ENST00000444315 LATS2Q9NRM7 1088 aa16.21■□□□□ 0.19
TSPAN9-204ENST00000444315 RUVBL2Q9Y230 463 aaKnown RBP16.21■□□□□ 0.19
TSPAN9-204ENST00000444315 MGAQ8IWI9 3026 aa16.21■□□□□ 0.18
TSPAN9-204ENST00000444315 LOC400499M0QZD8 3231 aa16.2■□□□□ 0.18
TSPAN9-204ENST00000444315 PABPN1LA6NDY0 278 aaKnown RBP16.2■□□□□ 0.18
TSPAN9-204ENST00000444315 C9J4A7 227 aa16.2■□□□□ 0.18
TSPAN9-204ENST00000444315 GPC4O75487 556 aa16.2■□□□□ 0.18
TSPAN9-204ENST00000444315 HBQ1P09105 142 aa16.2■□□□□ 0.18
TSPAN9-204ENST00000444315 PGAM1P18669 254 aa16.2■□□□□ 0.18
TSPAN9-204ENST00000444315 ARNTP27540 789 aa16.2■□□□□ 0.18
TSPAN9-204ENST00000444315 NFATC3Q12968 1075 aa16.2■□□□□ 0.18
TSPAN9-204ENST00000444315 CTBP1Q13363 440 aa16.2■□□□□ 0.18
TSPAN9-204ENST00000444315 SF1Q15637 639 aaKnown RBP16.2■□□□□ 0.18
TSPAN9-204ENST00000444315 RNASEH2BQ5TBB1 312 aaKnown RBP16.2■□□□□ 0.18
TSPAN9-204ENST00000444315 SYDE1Q6ZW31 735 aaPredicted RBP16.2■□□□□ 0.18
TSPAN9-204ENST00000444315 PRICKLE2Q7Z3G6 844 aa16.2■□□□□ 0.18
TSPAN9-204ENST00000444315 ZNF605Q86T29 641 aa16.2■□□□□ 0.18
TSPAN9-204ENST00000444315 KCNMB4Q86W47 210 aa16.2■□□□□ 0.18
TSPAN9-204ENST00000444315 PDIK1LQ8N165 341 aa16.2■□□□□ 0.18
TSPAN9-204ENST00000444315 CFAP36Q96G28 342 aa16.2■□□□□ 0.18
TSPAN9-204ENST00000444315 PITPNM3Q9BZ71 974 aa16.2■□□□□ 0.18
TSPAN9-204ENST00000444315 FAM114A2Q9NRY5 505 aa16.2■□□□□ 0.18
TSPAN9-204ENST00000444315 IARS2Q9NSE4 1012 aaKnown RBP16.2■□□□□ 0.18
TSPAN9-204ENST00000444315 TXLNGQ9NUQ3 528 aa16.2■□□□□ 0.18
TSPAN9-204ENST00000444315 SPHK1Q9NYA1 384 aa16.2■□□□□ 0.18
TSPAN9-204ENST00000444315 GPN3Q9UHW5 284 aaPredicted RBP16.2■□□□□ 0.18
TSPAN9-204ENST00000444315 C21orf140B9A014 251 aa16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 CCDC188H7C350 402 aa16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 RASGRF2O14827 1237 aa16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 OR2B3O76000 313 aa16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 SLCO2B1O94956 709 aa16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 SYF2O95926 243 aaKnown RBP16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 CATP04040 527 aaKnown RBP16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 F7P08709 466 aaPredicted RBP16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 AGXTP21549 392 aa16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 CD9P21926 228 aa16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 CASQ1P31415 396 aa16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 SLC1A2P43004 574 aa16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 KYNUQ16719 465 aa16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 SLC5A12Q1EHB4 618 aa16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 ATP1A1-AS1Q5TC04 95 aa16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 FAM199XQ6PEV8 388 aaPredicted RBP16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 CDHR3Q6ZTQ4 885 aa16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 DENND6AQ8IWF6 608 aa16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 LMNTD2Q8IXW0 634 aa16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 OR1L3Q8NH93 324 aa16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 OR2A14Q96R47 310 aa16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 SPRY4Q9C004 299 aa16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 ACTL8Q9H568 366 aa16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 ABCF3Q9NUQ8 709 aa16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 CDYLQ9Y232 598 aa16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 NEU2Q9Y3R4 380 aa16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 NFS1Q9Y697 457 aa16.19■□□□□ 0.18
TSPAN9-204ENST00000444315 VPS26AO75436 327 aa16.18■□□□□ 0.18
TSPAN9-204ENST00000444315 TTC4O95801 387 aa16.18■□□□□ 0.18
TSPAN9-204ENST00000444315 S1PR4O95977 384 aa16.18■□□□□ 0.18
TSPAN9-204ENST00000444315 POLE2P56282 527 aa16.18■□□□□ 0.18
TSPAN9-204ENST00000444315 DHX9Q08211 1270 aaKnown RBP16.18■□□□□ 0.18
TSPAN9-204ENST00000444315 HSP90AA5PQ58FG0 334 aa16.18■□□□□ 0.18
TSPAN9-204ENST00000444315 HP1BP3Q5SSJ5 553 aaPredicted RBP16.18■□□□□ 0.18
TSPAN9-204ENST00000444315 PRAMEF17Q5VTA0 474 aa16.18■□□□□ 0.18
TSPAN9-204ENST00000444315 PAPD7Q5XG87 772 aaKnown RBP16.18■□□□□ 0.18
TSPAN9-204ENST00000444315 PCSK4Q6UW60 755 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms