RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 FAM174BQ3ZCQ3 159 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 ATP13A5Q4VNC0 1218 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 MANEALQ5VSG8 457 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 DENND5AQ6IQ26 1287 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 ZCCHC8Q6NZY4 707 aaKnown RBP11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 PAGE2Q7Z2X7 111 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 SPPL2CQ8IUH8 684 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 EID3Q8N140 333 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 NELL1Q92832 810 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 SCRN2Q96FV2 425 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 OSBPL6Q9BZF3 934 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 PCDHAC1Q9H158 963 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 C1orf21Q9H246 121 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 SLC27A6Q9Y2P4 619 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 PCDHGA11Q9Y5H2 935 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 DGKBQ9Y6T7 804 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 IGLV3-10A0A075B6K4 115 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 POP7O75817 140 aaKnown RBP11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 CXCL10P02778 98 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 EIF2S1P05198 315 aaKnown RBP11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 EPORP19235 508 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 SGSHP51688 502 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 CLCN4P51793 760 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 UGT2A3Q6UWM9 527 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 ANKRD46Q86W74 232 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 DHRSXQ8N5I4 330 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 METTL25Q8N6Q8 603 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 MDGA1Q8NFP4 955 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 DGCR14Q96DF8 476 aaKnown RBP11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 BOCQ9BWV1 1114 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 IMPAD1Q9NX62 359 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 COQ6Q9Y2Z9 468 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 U3KQV3 271 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 SCN4AP35499 1836 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 GRXCR1A8MXD5 290 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 LOC730098B7Z3J9 87 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 H3BNX3 289 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 STX16O14662 325 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 CCDC159P0C7I6 412 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 ATP6V1E1P36543 226 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 NFKB2Q00653 900 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 LIPEQ05469 1076 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 SPIDRQ14159 915 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 SF1Q15637 639 aaKnown RBP11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 PPP1R3AQ16821 1122 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 SLC43A3Q8NBI5 491 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 SORT1Q99523 831 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 AIF1LQ9BQI0 150 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 SLC39A3Q9BRY0 314 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 EBPLQ9BY08 206 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 C6orf62Q9GZU0 229 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 MIR1-1HGQ9H1L0 117 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 ZBTB26Q9HCK0 441 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 IL26Q9NPH9 171 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 ADPRHL2Q9NX46 363 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 PCDH10Q9P2E7 1040 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 SDHDO14521 159 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 GPR39O43194 453 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 ANXA4P09525 319 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 ATXN1LP0C7T5 689 aaKnown RBP11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 SMIM18P0DKX4 95 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 GGT5P36269 586 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 PREPP48147 710 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 PPP1R8Q12972 351 aaKnown RBP11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 SEMA3AQ14563 771 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 UNC50Q53HI1 259 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 CPTPQ5TA50 214 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 MED27Q6P2C8 311 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 GOLGA7Q7Z5G4 137 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 ZNF614Q8N883 585 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 OR10G6Q8NH81 332 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 KXD1Q9BQD3 176 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 SELENONQ9NZV5 590 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 ATXN10Q9UBB4 475 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 HEMK1Q9Y5R4 338 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 ERAL1O75616 437 aaKnown RBP11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 NUP107P57740 925 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 GRSF1Q12849 480 aaKnown RBP eCLIP11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 TMEM115Q12893 351 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 OR4D1Q15615 310 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 NADK2Q4G0N4 442 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 GLYATQ6IB77 296 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 CYP2U1Q7Z449 544 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 CPXM2Q8N436 756 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 BPIFB6Q8NFQ5 453 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 MYLIPQ8WY64 445 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 CCM2Q9BSQ5 444 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 DZANK1Q9NVP4 752 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 TMCC3Q9ULS5 477 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 ACP5P13686 325 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 ACRV1P26436 265 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 GABRB3P28472 473 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 S100A5P33763 92 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 ARCN1P48444 511 aaKnown RBP11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 PTPN5P54829 565 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 RPS14P62263 151 aaKnown RBP11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 AADATQ8N5Z0 425 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 TEX26Q8N6G2 289 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 MAPK15Q8TD08 544 aa11.31□□□□□ -0.6
TRAPPC9-202ENST00000438773 COL26A1Q96A83 441 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms