RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 ACTR5Q9H9F9 607 aaPredicted RBP15.21■□□□□ 0.03
NUP50-210ENST00000434760 MRM3Q9HC36 420 aaKnown RBP15.21■□□□□ 0.03
NUP50-210ENST00000434760 ANAPC2Q9UJX6 822 aa15.21■□□□□ 0.03
NUP50-210ENST00000434760 TDRKHQ9Y2W6 561 aaKnown RBP15.21■□□□□ 0.03
NUP50-210ENST00000434760 SHANK1Q9Y566 2161 aa15.2■□□□□ 0.02
NUP50-210ENST00000434760 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.2■□□□□ 0.02
NUP50-210ENST00000434760 CD3EAPO15446 510 aaKnown RBP15.2■□□□□ 0.02
NUP50-210ENST00000434760 CEP104O60308 925 aa15.2■□□□□ 0.02
NUP50-210ENST00000434760 TMEM63AO94886 807 aa15.2■□□□□ 0.02
NUP50-210ENST00000434760 RAB40ALP0C0E4 278 aa15.2■□□□□ 0.02
NUP50-210ENST00000434760 RPS3P23396 243 aaKnown RBP eCLIP15.2■□□□□ 0.02
NUP50-210ENST00000434760 MGAT1P26572 445 aa15.2■□□□□ 0.02
NUP50-210ENST00000434760 TTPAP49638 278 aa15.2■□□□□ 0.02
NUP50-210ENST00000434760 RAB28P51157 221 aa15.2■□□□□ 0.02
NUP50-210ENST00000434760 HSPA14Q0VDF9 509 aa15.2■□□□□ 0.02
NUP50-210ENST00000434760 NCF4Q15080 339 aa15.2■□□□□ 0.02
NUP50-210ENST00000434760 SLC5A12Q1EHB4 618 aa15.2■□□□□ 0.02
NUP50-210ENST00000434760 PTCHD3Q3KNS1 767 aa15.2■□□□□ 0.02
NUP50-210ENST00000434760 CTSL3PQ5NE16 218 aa15.2■□□□□ 0.02
NUP50-210ENST00000434760 TCTN3Q6NUS6 607 aa15.2■□□□□ 0.02
NUP50-210ENST00000434760 TTC27Q6P3X3 843 aa15.2■□□□□ 0.02
NUP50-210ENST00000434760 UNC5DQ6UXZ4 953 aa15.2■□□□□ 0.02
NUP50-210ENST00000434760 MAIP1Q8WWC4 291 aa15.2■□□□□ 0.02
NUP50-210ENST00000434760 MFSD3Q96ES6 412 aa15.2■□□□□ 0.02
NUP50-210ENST00000434760 TTC1Q99614 292 aa15.2■□□□□ 0.02
NUP50-210ENST00000434760 NLNQ9BYT8 704 aa15.2■□□□□ 0.02
NUP50-210ENST00000434760 E7EQ34 232 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 F8W8V4 182 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 MKRN2OSH3BPM6 223 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 ZNF749O43361 778 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 PTGIRP43119 386 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 GCGRP47871 477 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 RPS15P62841 145 aaKnown RBP15.19■□□□□ 0.02
NUP50-210ENST00000434760 CDK16Q00536 496 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 CHAF1BQ13112 559 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 GBX1Q14549 363 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 KIR2DS3Q14952 304 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 KYNUQ16719 465 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 ANKRD22Q5VYY1 191 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 LRRC8BQ6P9F7 803 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 RASGEF1CQ8N431 466 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 LMNTD1Q8N9Z9 388 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 ASZ1Q8WWH4 475 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 THAP4Q8WY91 577 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 LPGAT1Q92604 370 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 CLIP3Q96DZ5 547 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 TCTN2Q96GX1 697 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 BIRC8Q96P09 236 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 TRIM56Q9BRZ2 755 aaKnown RBP15.19■□□□□ 0.02
NUP50-210ENST00000434760 GNPTGQ9UJJ9 305 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 TLK1Q9UKI8 766 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 TCFL5Q9UL49 500 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 TTC7AQ9ULT0 858 aaPredicted RBP15.19■□□□□ 0.02
NUP50-210ENST00000434760 SOX13Q9UN79 622 aa15.19■□□□□ 0.02
NUP50-210ENST00000434760 FARSAQ9Y285 508 aaKnown RBP15.19■□□□□ 0.02
NUP50-210ENST00000434760 MDC1Q14676 2089 aaKnown RBP15.19■□□□□ 0.02
NUP50-210ENST00000434760 KRT87PA6NCN2 255 aa15.18■□□□□ 0.02
NUP50-210ENST00000434760 APOA4P06727 396 aa15.18■□□□□ 0.02
NUP50-210ENST00000434760 KLK3P07288 261 aaPredicted RBP15.18■□□□□ 0.02
NUP50-210ENST00000434760 MAGP20916 626 aa15.18■□□□□ 0.02
NUP50-210ENST00000434760 NPY2RP49146 381 aa15.18■□□□□ 0.02
NUP50-210ENST00000434760 KCNC4Q03721 635 aa15.18■□□□□ 0.02
NUP50-210ENST00000434760 KIAA0930Q6ICG6 404 aaPredicted RBP15.18■□□□□ 0.02
NUP50-210ENST00000434760 RHBDD2Q6NTF9 364 aa15.18■□□□□ 0.02
NUP50-210ENST00000434760 GSTA5Q7RTV2 222 aa15.18■□□□□ 0.02
NUP50-210ENST00000434760 LRRC6Q86X45 466 aa15.18■□□□□ 0.02
NUP50-210ENST00000434760 FAM20CQ8IXL6 584 aa15.18■□□□□ 0.02
NUP50-210ENST00000434760 IL17FQ96PD4 163 aa15.18■□□□□ 0.02
NUP50-210ENST00000434760 GBP5Q96PP8 586 aa15.18■□□□□ 0.02
NUP50-210ENST00000434760 TSSK1BQ9BXA7 367 aa15.18■□□□□ 0.02
NUP50-210ENST00000434760 MLXIPLQ9NP71 852 aa15.18■□□□□ 0.02
NUP50-210ENST00000434760 BFARQ9NZS9 450 aa15.18■□□□□ 0.02
NUP50-210ENST00000434760 CIDEBQ9UHD4 219 aa15.18■□□□□ 0.02
NUP50-210ENST00000434760 RUVBL2Q9Y230 463 aaKnown RBP15.18■□□□□ 0.02
NUP50-210ENST00000434760 NEU2Q9Y3R4 380 aa15.18■□□□□ 0.02
NUP50-210ENST00000434760 MAST4O15021 2626 aa15.17■□□□□ 0.02
NUP50-210ENST00000434760 AP3B1O00203 1094 aa15.17■□□□□ 0.02
NUP50-210ENST00000434760 ZSCAN9O15535 394 aaPredicted RBP15.17■□□□□ 0.02
NUP50-210ENST00000434760 OR2B3O76000 313 aa15.17■□□□□ 0.02
NUP50-210ENST00000434760 PPARGP37231 505 aaPredicted RBP15.17■□□□□ 0.02
NUP50-210ENST00000434760 VPS41P49754 854 aa15.17■□□□□ 0.02
NUP50-210ENST00000434760 FOXK1P85037 733 aa15.17■□□□□ 0.02
NUP50-210ENST00000434760 TMED2Q15363 201 aa15.17■□□□□ 0.02
NUP50-210ENST00000434760 TRIP13Q15645 432 aaPredicted RBP15.17■□□□□ 0.02
NUP50-210ENST00000434760 CYP1B1Q16678 543 aa15.17■□□□□ 0.02
NUP50-210ENST00000434760 COLEC12Q5KU26 742 aa15.17■□□□□ 0.02
NUP50-210ENST00000434760 ARMC3Q5W041 872 aa15.17■□□□□ 0.02
NUP50-210ENST00000434760 PTRHD1Q6GMV3 140 aaKnown RBP15.17■□□□□ 0.02
NUP50-210ENST00000434760 CES3Q6UWW8 571 aa15.17■□□□□ 0.02
NUP50-210ENST00000434760 CAND1Q86VP6 1230 aaKnown RBP15.17■□□□□ 0.02
NUP50-210ENST00000434760 DNAJC22Q8N4W6 341 aa15.17■□□□□ 0.02
NUP50-210ENST00000434760 OR2L8Q8NGY9 312 aa15.17■□□□□ 0.02
NUP50-210ENST00000434760 DENND1AQ8TEH3 1009 aa15.17■□□□□ 0.02
NUP50-210ENST00000434760 DPH2Q9BQC3 489 aaPredicted RBP15.17■□□□□ 0.02
NUP50-210ENST00000434760 HOMER3Q9NSC5 361 aa15.17■□□□□ 0.02
NUP50-210ENST00000434760 SERTAD3Q9UJW9 196 aa15.17■□□□□ 0.02
NUP50-210ENST00000434760 SNX7Q9UNH6 387 aa15.17■□□□□ 0.02
NUP50-210ENST00000434760 NFS1Q9Y697 457 aa15.17■□□□□ 0.02
NUP50-210ENST00000434760 DOCK10Q96BY6 2186 aa15.17■□□□□ 0.02
NUP50-210ENST00000434760 ARGFXA6NJG6 315 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms