RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 TMEM161AQ9NX61 479 aa7.4□□□□□ -1.23
SYNPO2-202ENST00000429713 CASKO14936 926 aa7.4□□□□□ -1.23
SYNPO2-202ENST00000429713 DPEP1P16444 411 aa7.4□□□□□ -1.23
SYNPO2-202ENST00000429713 MAPK10P53779 464 aa7.4□□□□□ -1.23
SYNPO2-202ENST00000429713 CHAC2Q8WUX2 184 aa7.4□□□□□ -1.23
SYNPO2-202ENST00000429713 TNFAIP8L1Q8WVP5 186 aa7.4□□□□□ -1.23
SYNPO2-202ENST00000429713 IDI2Q9BXS1 227 aa7.4□□□□□ -1.23
SYNPO2-202ENST00000429713 SIPA1L1O43166 1804 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 NCF1BA6NI72 391 aaPredicted RBP7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 NCF1CA8MVU1 366 aaPredicted RBP7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 PSMD10O75832 226 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 CPNE6O95741 557 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 HLA-DPB1P04440 258 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 ADRB2P07550 413 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 DHRS4L1P0CG22 281 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 TCF3P15923 654 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 IL1R2P27930 398 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 NAGLUP54802 743 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 PLEKHN1Q494U1 663 aaPredicted RBP7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 DNAJC14Q6Y2X3 702 aaPredicted RBP7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 TAF8Q7Z7C8 310 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 MFSD6LQ8IWD5 586 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 TRIB2Q92519 343 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 FAM163AQ96GL9 167 aaPredicted RBP7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 WDR18Q9BV38 432 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 COQ10BQ9H8M1 238 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 FTH1P02794 183 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 CDH8P55286 799 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 CRADDP78560 199 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 CACNB2Q08289 660 aaPredicted RBP7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 CSHL1Q14406 222 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 VEPH1Q14D04 833 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 SNAPC1Q16533 368 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 CYP2A13Q16696 494 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 FAM117BQ6P1L5 589 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 CYP20A1Q6UW02 462 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 XKR5Q6UX68 686 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 DEF8Q6ZN54 512 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 SNAPC3Q92966 411 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 SLC7A5P2Q9GIP4 190 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 POFUT2Q9Y2G5 429 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 PLOD3O60568 738 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 ATE1O95260 518 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 CXCL8P10145 99 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 POU2F1P14859 743 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 EFNA1P20827 205 aaPredicted RBP7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 KELP23276 732 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 B2MP61769 119 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 ADIGQ0VDE8 80 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 KIAA1614Q5VZ46 1190 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 LPCAT3Q6P1A2 487 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 RRNAD1Q96FB5 475 aaKnown RBP7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 SETD4Q9NVD3 440 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 PAK4O96013 591 aaPredicted RBP7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 PCSK1P29120 753 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 CHRNA5P30532 468 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 RPL9P32969 192 aaKnown RBP7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 TAS2R40P59535 323 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 BLOC1S3Q6QNY0 202 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 ZDHHC24Q6UX98 284 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 FAM124AQ86V42 546 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 FAM131BQ86XD5 332 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 DCP1BQ8IZD4 617 aaKnown RBP7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 CDKN2AIPNLQ96HQ2 116 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 IL1RAPQ9NPH3 570 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 DDTLA6NHG4 134 aaPredicted RBP7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 SNNO75324 88 aaPredicted RBP7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 CNPP09543 421 aaKnown RBP7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 PAICSP22234 425 aaKnown RBP7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 ECHS1P30084 290 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 ZNF169Q14929 603 aaPredicted RBP7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 SGO1Q5FBB7 561 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 TMEM203Q969S6 136 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 SIPA1Q96FS4 1042 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 COQ10AQ96MF6 247 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 SLC9A7Q96T83 725 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 B3GNT5Q9BYG0 378 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 METTL8Q9H825 291 aaKnown RBP7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 GGA3Q9NZ52 723 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 EVLQ9UI08 416 aaPredicted RBP7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 PHIPQ8WWQ0 1821 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 E7ESA3 106 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 BNIP3LO60238 219 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 ATP6AP2O75787 350 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 UCHL1P09936 223 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 CSF2RAP15509 400 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 RANP62826 216 aaKnown RBP7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 AVPI1Q5T686 147 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 ASPGQ86U10 573 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 COMMD7Q86VX2 200 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 NATD1Q8N6N6 113 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 TMED9Q9BVK6 235 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 DOCK1Q14185 1865 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 UBBP0CG47 229 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 UBCP0CG48 685 aaKnown RBP7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 ARSFP54793 590 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 RPS27AP62979 156 aaKnown RBP7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 UBA52P62987 128 aaKnown RBP7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 HIST2H3PS2Q5TEC6 136 aa7.39□□□□□ -1.23
SYNPO2-202ENST00000429713 RNF130Q86XS8 419 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms