RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 SLC1A2P43004 574 aa17.49■□□□□ 0.39
SSR4P1-202ENST00000429427 GABRA4P48169 554 aa17.49■□□□□ 0.39
SSR4P1-202ENST00000429427 CTBP1Q13363 440 aa17.49■□□□□ 0.39
SSR4P1-202ENST00000429427 RNF187Q5TA31 235 aaPredicted RBP17.49■□□□□ 0.39
SSR4P1-202ENST00000429427 ATP1A1-AS1Q5TC04 95 aa17.49■□□□□ 0.39
SSR4P1-202ENST00000429427 IZUMO3Q5VZ72 239 aa17.49■□□□□ 0.39
SSR4P1-202ENST00000429427 SDCCAG8Q86SQ7 713 aaPredicted RBP17.49■□□□□ 0.39
SSR4P1-202ENST00000429427 DCUN1D3Q8IWE4 304 aa17.49■□□□□ 0.39
SSR4P1-202ENST00000429427 STAMBPL1Q96FJ0 436 aa17.49■□□□□ 0.39
SSR4P1-202ENST00000429427 FCRL4Q96PJ5 515 aa17.49■□□□□ 0.39
SSR4P1-202ENST00000429427 PANX3Q96QZ0 392 aa17.49■□□□□ 0.39
SSR4P1-202ENST00000429427 TRIM51Q9BSJ1 452 aa17.49■□□□□ 0.39
SSR4P1-202ENST00000429427 FBXO6Q9NRD1 293 aaPredicted RBP17.49■□□□□ 0.39
SSR4P1-202ENST00000429427 MAD1L1Q9Y6D9 718 aa17.49■□□□□ 0.39
SSR4P1-202ENST00000429427 CTAGE9A4FU28 777 aa17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 H3BMH7 237 aa17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 OAS2P29728 719 aaKnown RBP17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 BDKRB1P46663 353 aa17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 RAB28P51157 221 aa17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 CLCN7P51798 805 aa17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 DHX9Q08211 1270 aaKnown RBP17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 GPS2Q13227 327 aa17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 TMED2Q15363 201 aa17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 ACSBG2Q5FVE4 666 aa17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 PLEKHS1Q5SXH7 462 aa17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 FAM199XQ6PEV8 388 aaPredicted RBP17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 OTOAQ7RTW8 1153 aa17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 HOOK3Q86VS8 718 aa17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 BPHLQ86WA6 291 aaPredicted RBP17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 ZNF843Q8N446 348 aa17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 C2orf73Q8N5S3 287 aaPredicted RBP17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 ZSCAN1Q8NBB4 408 aa17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 DENND1AQ8TEH3 1009 aa17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 CT55Q8WUE5 264 aa17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 STARD8Q92502 1023 aa17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 LHX9Q9NQ69 397 aa17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 KCND1Q9NSA2 647 aa17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 TSR3Q9UJK0 312 aaKnown RBP17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 SPTA1P02549 2419 aa17.48■□□□□ 0.39
SSR4P1-202ENST00000429427 COL6A6A6NMZ7 2263 aa17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 ZNF891A8MT65 544 aaPredicted RBP17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 TMEM150CB9EJG8 249 aa17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 TTI1O43156 1089 aa17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 SCRG1O75711 98 aa17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 C1orf105O95561 183 aa17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 FAM87AP0C7U9 286 aa17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 PKMP14618 531 aaKnown RBP17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 DLSTP36957 453 aa17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 MPP1Q00013 466 aa17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 DR1Q01658 176 aa17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 COL9A2Q14055 689 aaPredicted RBP17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 CRYMQ14894 314 aa17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 LONRF1Q17RB8 773 aa17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 TMTC4Q5T4D3 741 aa17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 LCN10Q6JVE6 187 aa17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 ZNF517Q6ZMY9 492 aaPredicted RBP17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 C19orf47Q8N9M1 422 aaKnown RBP17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 KIAA1143Q96AT1 154 aaPredicted RBP17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 LATS2Q9NRM7 1088 aa17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 C20orf96Q9NUD7 363 aaPredicted RBP17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 INTS10Q9NVR2 710 aaKnown RBP17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 KLHL20Q9Y2M5 609 aa17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 FAM169AQ9Y6X4 670 aa17.47■□□□□ 0.39
SSR4P1-202ENST00000429427 BAHCC1Q9P281 2608 aa17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 RASGRF2O14827 1237 aa17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 PRICKLE3O43900 615 aaPredicted RBP17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 MATN4O95460 622 aa17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 FURINP09958 794 aa17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 PRKAR1AP10644 381 aa17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 PGAM1P18669 254 aa17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 CD9P21926 228 aa17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 RORAP35398 523 aa17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 MRPS25P82663 173 aaKnown RBP17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 TIAL1Q01085 375 aaKnown RBP eCLIP17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 CDC20Q12834 499 aa17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 DEFB110Q30KQ9 67 aa17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 HSP90AA5PQ58FG0 334 aa17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 HIBCHQ6NVY1 386 aaPredicted RBP17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 CYB5D1Q6P9G0 228 aa17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 CNSTQ6PJW8 725 aa17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 TAX1BP1Q86VP1 789 aa17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 TMEM126BQ8IUX1 230 aa17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 ZBTB2Q8N680 514 aa17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 OR8K5Q8NH50 307 aa17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 EBNA1BP2Q99848 306 aaKnown RBP17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 SLC17A6Q9P2U8 582 aa17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 PADI1Q9ULC6 663 aa17.46■□□□□ 0.39
SSR4P1-202ENST00000429427 A0A0J9YY10 115 aa17.45■□□□□ 0.38
SSR4P1-202ENST00000429427 H3BMM5 538 aa17.45■□□□□ 0.38
SSR4P1-202ENST00000429427 KPNA5O15131 536 aa17.45■□□□□ 0.38
SSR4P1-202ENST00000429427 CPNE3O75131 537 aaKnown RBP17.45■□□□□ 0.38
SSR4P1-202ENST00000429427 HAUS5O94927 633 aa17.45■□□□□ 0.38
SSR4P1-202ENST00000429427 CHRM3P20309 590 aa17.45■□□□□ 0.38
SSR4P1-202ENST00000429427 GABRB3P28472 473 aa17.45■□□□□ 0.38
SSR4P1-202ENST00000429427 ATP5DP30049 168 aa17.45■□□□□ 0.38
SSR4P1-202ENST00000429427 DNASE1L3Q13609 305 aa17.45■□□□□ 0.38
SSR4P1-202ENST00000429427 THOC5Q13769 683 aaKnown RBP17.45■□□□□ 0.38
SSR4P1-202ENST00000429427 KIR2DS3Q14952 304 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms