RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 STMN3Q9NZ72 180 aa11.18□□□□□ -0.62
CECR3-201ENST00000428828 CNOT6Q9ULM6 557 aaKnown RBP11.18□□□□□ -0.62
CECR3-201ENST00000428828 PCDHB9Q9Y5E1 797 aa11.18□□□□□ -0.62
CECR3-201ENST00000428828 SNX13Q9Y5W8 968 aa11.18□□□□□ -0.62
CECR3-201ENST00000428828 DOCK9Q9BZ29 2069 aa11.18□□□□□ -0.62
CECR3-201ENST00000428828 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.17□□□□□ -0.62
CECR3-201ENST00000428828 SAGE2PA6NJ88 616 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 CXorf49A8MYA2 514 aaPredicted RBP11.17□□□□□ -0.62
CECR3-201ENST00000428828 H0YAE9 185 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 PLK4O00444 970 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 SOCS2O14508 198 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 PHGDHO43175 533 aaKnown RBP11.17□□□□□ -0.62
CECR3-201ENST00000428828 UGT2B11O75310 529 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 PRKCGP05129 697 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 CCDC159P0C7I6 412 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 NAGAP17050 411 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 NR4A1P22736 598 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 CES1P23141 567 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 GSTM2P28161 218 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 GRK3P35626 688 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 CASP3P42574 277 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 MAPK8P45983 427 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 SERPINB10P48595 397 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 CSNK1DP48730 415 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 CLK3P49761 638 aaKnown RBP11.17□□□□□ -0.62
CECR3-201ENST00000428828 PRKAA2P54646 552 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 PKNOX1P55347 436 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 FZD5Q13467 585 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 NPTX1Q15818 432 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 PGS1Q32NB8 556 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 EOGTQ5NDL2 527 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 ERAP2Q6P179 960 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 TMEM92Q6UXU6 159 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 GDPD4Q6W3E5 623 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 ZCCHC7Q8N3Z6 543 aaKnown RBP11.17□□□□□ -0.62
CECR3-201ENST00000428828 DNAAF3Q8N9W5 541 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 MCUQ8NE86 351 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 SNX19Q92543 992 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 FKBP10Q96AY3 582 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 SDCCAG3Q96C92 435 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 PPP1R2P1Q96PQ5 205 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 ZBTB26Q9HCK0 441 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 C2orf42Q9NWW7 574 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 ZC3H7BQ9UGR2 993 aaKnown RBP11.17□□□□□ -0.62
CECR3-201ENST00000428828 MMP17Q9ULZ9 603 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 BPTFQ12830 3046 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 EML5Q05BV3 1969 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 A0A1W2PQF6 199 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 TCRBV21S2A2A0A5A6 115 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 SNPHO15079 494 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 ABCB7O75027 752 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 RASAL1O95294 804 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 PTTG1O95997 202 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 PRNPP04156 253 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 CDH1P12830 882 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 TPSB2P20231 275 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 IL12AP29459 219 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 RRM2P31350 389 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 ARCN1P48444 511 aaKnown RBP11.17□□□□□ -0.62
CECR3-201ENST00000428828 PPP5CP53041 499 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 PPP2R2BQ00005 443 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 CAMK2GQ13555 558 aaPredicted RBP11.17□□□□□ -0.62
CECR3-201ENST00000428828 GAS6Q14393 721 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 CDK10Q15131 360 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 TPSAB1Q15661 275 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 ATP6AP1Q15904 470 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 ARMC12Q5T9G4 340 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 N4BP2L1Q5TBK1 243 aaPredicted RBP11.17□□□□□ -0.62
CECR3-201ENST00000428828 KCTD11Q693B1 232 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 LINC00523Q86TU6 105 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 ZSWIM9Q86XI8 627 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 CCDC28AQ8IWP9 274 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 PHF10Q8WUB8 498 aaKnown RBP11.17□□□□□ -0.62
CECR3-201ENST00000428828 VOPP1Q96AW1 172 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 TADA1Q96BN2 335 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 SMIM14Q96QK8 99 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 FAM129BQ96TA1 746 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 NELL2Q99435 816 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 CPEB1Q9BZB8 566 aaKnown RBP11.17□□□□□ -0.62
CECR3-201ENST00000428828 SEMA6AQ9H2E6 1030 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 SUV39H2Q9H5I1 410 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 PLAC1Q9HBJ0 212 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 EIF2B3Q9NR50 452 aaKnown RBP11.17□□□□□ -0.62
CECR3-201ENST00000428828 IL20Q9NYY1 176 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 KLQ9UEF7 1012 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 VTI1BQ9UEU0 232 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 WBP11Q9Y2W2 641 aaKnown RBP11.17□□□□□ -0.62
CECR3-201ENST00000428828 SIT1Q9Y3P8 196 aa11.17□□□□□ -0.62
CECR3-201ENST00000428828 NUMA1Q14980 2115 aa11.16□□□□□ -0.62
CECR3-201ENST00000428828 HEATR9A2RTY3 570 aa11.16□□□□□ -0.62
CECR3-201ENST00000428828 ZSCAN5BA6NJL1 495 aa11.16□□□□□ -0.62
CECR3-201ENST00000428828 AQP12BA6NM10 295 aa11.16□□□□□ -0.62
CECR3-201ENST00000428828 POLR1CO15160 346 aaPredicted RBP11.16□□□□□ -0.62
CECR3-201ENST00000428828 SLC4A1P02730 911 aa11.16□□□□□ -0.62
CECR3-201ENST00000428828 KRT8P05787 483 aa11.16□□□□□ -0.62
CECR3-201ENST00000428828 GNAO1P09471 354 aa11.16□□□□□ -0.62
CECR3-201ENST00000428828 PIRTP0C851 137 aa11.16□□□□□ -0.62
CECR3-201ENST00000428828 ENO3P13929 434 aaPredicted RBP11.16□□□□□ -0.62
CECR3-201ENST00000428828 TPH1P17752 444 aa11.16□□□□□ -0.62
CECR3-201ENST00000428828 CTPS1P17812 591 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms