RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 CSNK1G3Q9Y6M4 447 aa15.76■□□□□ 0.11
C9orf3-206ENST00000428313 ANKRD31Q8N7Z5 1873 aa15.76■□□□□ 0.11
C9orf3-206ENST00000428313 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 CXCR6O00574 342 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 PRKCBP05771 671 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 CDK1P06493 297 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 NFICP08651 508 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 ALAS2P22557 587 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 NRIP1P48552 1158 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 SOWAHCQ53LP3 525 aaPredicted RBP15.75■□□□□ 0.11
C9orf3-206ENST00000428313 BRAT1Q6PJG6 821 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 TMPRSS11AQ6ZMR5 421 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 LINC00518Q8N0U6 118 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 PROKR1Q8TCW9 393 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 GIMAP5Q96F15 307 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 HYLS1Q96M11 299 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 OLA1Q9NTK5 396 aaKnown RBP15.75■□□□□ 0.11
C9orf3-206ENST00000428313 TMEM39AQ9NV64 488 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 COQ3Q9NZJ6 369 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 NEUROG3Q9Y4Z2 214 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 MAFBQ9Y5Q3 323 aaPredicted RBP15.75■□□□□ 0.11
C9orf3-206ENST00000428313 MYLKQ15746 1914 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 PRR23AA6NEV1 266 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 E9PQ18 207 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 TSPAN4O14817 238 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 VPS26AO75436 327 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 ZNF250P15622 560 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 HMGCLP35914 325 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 CPT1AP50416 773 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 ARHGDIAP52565 204 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 ARPP19P56211 112 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 RAB25P57735 213 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.75■□□□□ 0.11
C9orf3-206ENST00000428313 PON2Q15165 354 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 GPR19Q15760 415 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 DACT2Q5SW24 774 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 HECTD2Q5U5R9 776 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 GPR149Q86SP6 731 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 KRT73Q86Y46 540 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 TRIM48Q8IWZ4 208 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 OR8H1Q8NGG4 311 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 NPLOC4Q8TAT6 608 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 CLEC4CQ8WTT0 213 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 KLHL6Q8WZ60 621 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 DNASE1L2Q92874 299 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 TBL1YQ9BQ87 522 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 TNKS2Q9H2K2 1166 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 SPNS1Q9H2V7 528 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 RPF1Q9H9Y2 349 aaKnown RBP15.75■□□□□ 0.11
C9orf3-206ENST00000428313 WASH6PQ9NQA3 447 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 U3KQV3 271 aa15.75■□□□□ 0.11
C9orf3-206ENST00000428313 ELOVL7A1L3X0 281 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 CACNG3O60359 315 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 HMGB2P26583 209 aaKnown RBP15.74■□□□□ 0.11
C9orf3-206ENST00000428313 MAGEA2P43356 314 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 PER3P56645 1201 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 LCP2Q13094 533 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 ZNF267Q14586 743 aaPredicted RBP15.74■□□□□ 0.11
C9orf3-206ENST00000428313 C19orf48Q6RUI8 117 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 ANKS3Q6ZW76 656 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 DET1Q7L5Y6 550 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 TESCQ96BS2 214 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 COQ8BQ96D53 544 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 MSANTD3Q96H12 275 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 CRELD1Q96HD1 420 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 HPDLQ96IR7 371 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 GPR137Q96N19 417 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 C11orf54Q9H0W9 315 aaPredicted RBP15.74■□□□□ 0.11
C9orf3-206ENST00000428313 PTPRHQ9HD43 1115 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 HECAQ9UBI9 543 aaPredicted RBP15.74■□□□□ 0.11
C9orf3-206ENST00000428313 SRRDQ9UH36 339 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 AAR2Q9Y312 384 aaKnown RBP15.74■□□□□ 0.11
C9orf3-206ENST00000428313 ATG13O75143 517 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 HOXD4P09016 255 aaPredicted RBP15.74■□□□□ 0.11
C9orf3-206ENST00000428313 DDCP20711 480 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 MAB21L1Q13394 359 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 KCNC3Q14003 757 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 SLC25A52Q3SY17 297 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 SNX20Q7Z614 316 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 CCDC71Q8IV32 467 aaPredicted RBP15.74■□□□□ 0.11
C9orf3-206ENST00000428313 P3H2Q8IVL5 708 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 C9orf62Q8N4C0 152 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 COL21A1Q96P44 957 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 PRKD2Q9BZL6 878 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 PAK6Q9NQU5 681 aaPredicted RBP15.74■□□□□ 0.11
C9orf3-206ENST00000428313 ZNF302Q9NR11 478 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 VNN3Q9NY84 501 aa15.74■□□□□ 0.11
C9orf3-206ENST00000428313 MRPL39Q9NYK5 338 aaKnown RBP15.74■□□□□ 0.11
C9orf3-206ENST00000428313 PCDHGA12O60330 932 aa15.73■□□□□ 0.11
C9orf3-206ENST00000428313 ZNF623O75123 536 aa15.73■□□□□ 0.11
C9orf3-206ENST00000428313 CRCPO75575 148 aa15.73■□□□□ 0.11
C9orf3-206ENST00000428313 CYP7B1O75881 506 aa15.73■□□□□ 0.11
C9orf3-206ENST00000428313 STAU1O95793 577 aaKnown RBP15.73■□□□□ 0.11
C9orf3-206ENST00000428313 CXCL8P10145 99 aa15.73■□□□□ 0.11
C9orf3-206ENST00000428313 HOXA9P31269 272 aa15.73■□□□□ 0.11
C9orf3-206ENST00000428313 MATKP42679 507 aa15.73■□□□□ 0.11
C9orf3-206ENST00000428313 SULT1E1P49888 294 aa15.73■□□□□ 0.11
C9orf3-206ENST00000428313 SP4Q02446 784 aa15.73■□□□□ 0.11
C9orf3-206ENST00000428313 TAB1Q15750 504 aa15.73■□□□□ 0.11
C9orf3-206ENST00000428313 LEXMQ3ZCV2 418 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms