RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 H3BMH7 237 aa19.33■□□□□ 0.68
CCDC107-206ENST00000426546 AP3B1O00203 1094 aa19.33■□□□□ 0.68
CCDC107-206ENST00000426546 PTGIRP43119 386 aa19.33■□□□□ 0.68
CCDC107-206ENST00000426546 GABRA4P48169 554 aa19.33■□□□□ 0.68
CCDC107-206ENST00000426546 TTPAP49638 278 aa19.33■□□□□ 0.68
CCDC107-206ENST00000426546 SEMA3AQ14563 771 aa19.33■□□□□ 0.68
CCDC107-206ENST00000426546 KIR2DS3Q14952 304 aa19.33■□□□□ 0.68
CCDC107-206ENST00000426546 SLC5A12Q1EHB4 618 aa19.33■□□□□ 0.68
CCDC107-206ENST00000426546 PTCHD3Q3KNS1 767 aa19.33■□□□□ 0.68
CCDC107-206ENST00000426546 PCID2Q5JVF3 399 aa19.33■□□□□ 0.68
CCDC107-206ENST00000426546 ZNF385CQ66K41 422 aaPredicted RBP19.33■□□□□ 0.68
CCDC107-206ENST00000426546 CPZQ66K79 652 aa19.33■□□□□ 0.68
CCDC107-206ENST00000426546 MAIP1Q8WWC4 291 aa19.33■□□□□ 0.68
CCDC107-206ENST00000426546 DHRS4Q9BTZ2 278 aa19.33■□□□□ 0.68
CCDC107-206ENST00000426546 ING2Q9H160 280 aa19.33■□□□□ 0.68
CCDC107-206ENST00000426546 ACSS2Q9NR19 701 aa19.33■□□□□ 0.68
CCDC107-206ENST00000426546 CHRAC1Q9NRG0 131 aa19.33■□□□□ 0.68
CCDC107-206ENST00000426546 CATSPERZQ9NTU4 200 aa19.33■□□□□ 0.68
CCDC107-206ENST00000426546 CDYLQ9Y232 598 aa19.33■□□□□ 0.68
CCDC107-206ENST00000426546 UTP20O75691 2785 aaKnown RBP19.32■□□□□ 0.68
CCDC107-206ENST00000426546 ARGFXA6NJG6 315 aa19.32■□□□□ 0.68
CCDC107-206ENST00000426546 C9J4A7 227 aa19.32■□□□□ 0.68
CCDC107-206ENST00000426546 GPC4O75487 556 aa19.32■□□□□ 0.68
CCDC107-206ENST00000426546 OR2B3O76000 313 aa19.32■□□□□ 0.68
CCDC107-206ENST00000426546 PDGFAP04085 211 aa19.32■□□□□ 0.68
CCDC107-206ENST00000426546 RPN2P04844 631 aa19.32■□□□□ 0.68
CCDC107-206ENST00000426546 APOA4P06727 396 aa19.32■□□□□ 0.68
CCDC107-206ENST00000426546 ZSCAN5DPP0CG00 497 aa19.32■□□□□ 0.68
CCDC107-206ENST00000426546 AGXTP21549 392 aa19.32■□□□□ 0.68
CCDC107-206ENST00000426546 PKLRP30613 574 aa19.32■□□□□ 0.68
CCDC107-206ENST00000426546 PGDP52209 483 aa19.32■□□□□ 0.68
CCDC107-206ENST00000426546 MLLT10P55197 1068 aa19.32■□□□□ 0.68
CCDC107-206ENST00000426546 HSPA14Q0VDF9 509 aa19.32■□□□□ 0.68
CCDC107-206ENST00000426546 NCF4Q15080 339 aa19.32■□□□□ 0.68
CCDC107-206ENST00000426546 ZIC1Q15915 447 aa19.32■□□□□ 0.68
CCDC107-206ENST00000426546 UNC5DQ6UXZ4 953 aa19.32■□□□□ 0.68
CCDC107-206ENST00000426546 C17orf62Q9BQA9 187 aa19.32■□□□□ 0.68
CCDC107-206ENST00000426546 SLC25A23Q9BV35 468 aa19.32■□□□□ 0.68
CCDC107-206ENST00000426546 IL22Q9GZX6 179 aa19.32■□□□□ 0.68
CCDC107-206ENST00000426546 MLXIPLQ9NP71 852 aa19.32■□□□□ 0.68
CCDC107-206ENST00000426546 TREX1Q9NSU2 369 aa19.32■□□□□ 0.68
CCDC107-206ENST00000426546 PPP2R2CQ9Y2T4 447 aa19.32■□□□□ 0.68
CCDC107-206ENST00000426546 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.32■□□□□ 0.68
CCDC107-206ENST00000426546 PRMT5O14744 637 aaPredicted RBP19.31■□□□□ 0.68
CCDC107-206ENST00000426546 AOAHP28039 575 aa19.31■□□□□ 0.68
CCDC107-206ENST00000426546 PEBP1P30086 187 aaKnown RBP19.31■□□□□ 0.68
CCDC107-206ENST00000426546 RAB28P51157 221 aa19.31■□□□□ 0.68
CCDC107-206ENST00000426546 CSE1LP55060 971 aaKnown RBP19.31■□□□□ 0.68
CCDC107-206ENST00000426546 BASP1P80723 227 aaKnown RBP19.31■□□□□ 0.68
CCDC107-206ENST00000426546 CHAF1BQ13112 559 aa19.31■□□□□ 0.68
CCDC107-206ENST00000426546 TMED2Q15363 201 aa19.31■□□□□ 0.68
CCDC107-206ENST00000426546 KYNUQ16719 465 aa19.31■□□□□ 0.68
CCDC107-206ENST00000426546 DEFB110Q30KQ9 67 aa19.31■□□□□ 0.68
CCDC107-206ENST00000426546 PAPD7Q5XG87 772 aaKnown RBP19.31■□□□□ 0.68
CCDC107-206ENST00000426546 RHBDD2Q6NTF9 364 aa19.31■□□□□ 0.68
CCDC107-206ENST00000426546 ATCAYQ86WG3 371 aa19.31■□□□□ 0.68
CCDC107-206ENST00000426546 VRK3Q8IV63 474 aa19.31■□□□□ 0.68
CCDC107-206ENST00000426546 DCUN1D3Q8IWE4 304 aa19.31■□□□□ 0.68
CCDC107-206ENST00000426546 MPP5Q8N3R9 675 aa19.31■□□□□ 0.68
CCDC107-206ENST00000426546 LKAAEAR1Q8TD35 194 aa19.31■□□□□ 0.68
CCDC107-206ENST00000426546 LZTFL1Q9NQ48 299 aa19.31■□□□□ 0.68
CCDC107-206ENST00000426546 MARCH4Q9P2E8 410 aaPredicted RBP19.31■□□□□ 0.68
CCDC107-206ENST00000426546 PLAGL1Q9UM63 463 aa19.31■□□□□ 0.68
CCDC107-206ENST00000426546 SRPK3Q9UPE1 567 aa19.31■□□□□ 0.68
CCDC107-206ENST00000426546 PADI2Q9Y2J8 665 aa19.31■□□□□ 0.68
CCDC107-206ENST00000426546 SPTAN1Q13813 2472 aaKnown RBP19.31■□□□□ 0.68
CCDC107-206ENST00000426546 IQCF5A8MTL0 148 aa19.3■□□□□ 0.68
CCDC107-206ENST00000426546 ISM1B1AKI9 464 aa19.3■□□□□ 0.68
CCDC107-206ENST00000426546 CD3EAPO15446 510 aaKnown RBP19.3■□□□□ 0.68
CCDC107-206ENST00000426546 ZSCAN9O15535 394 aaPredicted RBP19.3■□□□□ 0.68
CCDC107-206ENST00000426546 HCRTR1O43613 425 aa19.3■□□□□ 0.68
CCDC107-206ENST00000426546 CEACAM4O75871 244 aa19.3■□□□□ 0.68
CCDC107-206ENST00000426546 TMEM63AO94886 807 aa19.3■□□□□ 0.68
CCDC107-206ENST00000426546 SLCO2B1O94956 709 aa19.3■□□□□ 0.68
CCDC107-206ENST00000426546 FGGP02679 453 aa19.3■□□□□ 0.68
CCDC107-206ENST00000426546 NPY2RP49146 381 aa19.3■□□□□ 0.68
CCDC107-206ENST00000426546 SESN2P58004 480 aaPredicted RBP19.3■□□□□ 0.68
CCDC107-206ENST00000426546 CDK16Q00536 496 aa19.3■□□□□ 0.68
CCDC107-206ENST00000426546 GSTA5Q7RTV2 222 aa19.3■□□□□ 0.68
CCDC107-206ENST00000426546 TRIM58Q8NG06 486 aa19.3■□□□□ 0.68
CCDC107-206ENST00000426546 PROKR1Q8TCW9 393 aa19.3■□□□□ 0.68
CCDC107-206ENST00000426546 SLC22A18Q96BI1 424 aa19.3■□□□□ 0.68
CCDC107-206ENST00000426546 MENTQ9BUN1 341 aa19.3■□□□□ 0.68
CCDC107-206ENST00000426546 BFARQ9NZS9 450 aa19.3■□□□□ 0.68
CCDC107-206ENST00000426546 GNPTGQ9UJJ9 305 aa19.3■□□□□ 0.68
CCDC107-206ENST00000426546 PYCARDQ9ULZ3 195 aa19.3■□□□□ 0.68
CCDC107-206ENST00000426546 PCDHGB7Q9Y5F8 929 aa19.3■□□□□ 0.68
CCDC107-206ENST00000426546 CCL11P51671 97 aa19.29■□□□□ 0.68
CCDC107-206ENST00000426546 CRADDP78560 199 aa19.29■□□□□ 0.68
CCDC107-206ENST00000426546 C4orf17Q53FE4 359 aa19.29■□□□□ 0.68
CCDC107-206ENST00000426546 FAM69BQ5VUD6 431 aa19.29■□□□□ 0.68
CCDC107-206ENST00000426546 TLDC1Q6P9B6 456 aa19.29■□□□□ 0.68
CCDC107-206ENST00000426546 MED25Q71SY5 747 aa19.29■□□□□ 0.68
CCDC107-206ENST00000426546 LDB1Q86U70 411 aaPredicted RBP19.29■□□□□ 0.68
CCDC107-206ENST00000426546 LRRC6Q86X45 466 aa19.29■□□□□ 0.68
CCDC107-206ENST00000426546 RAB43Q86YS6 212 aa19.29■□□□□ 0.68
CCDC107-206ENST00000426546 DNAJC22Q8N4W6 341 aa19.29■□□□□ 0.68
CCDC107-206ENST00000426546 TMEM102Q8N9M5 508 aaPredicted RBP19.29■□□□□ 0.68
CCDC107-206ENST00000426546 LINC01555Q8NAE3 123 aa19.29■□□□□ 0.68
CCDC107-206ENST00000426546 PANX3Q96QZ0 392 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms