RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 OPN5Q6U736 354 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SPOCD1Q6ZMY3 1216 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 CCDC197Q8NCU1 140 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 TRMT10AQ8TBZ6 339 aaKnown RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 CENPIQ92674 756 aaPredicted RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 TCEAL3Q969E4 200 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 VPS33AQ96AX1 596 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SLC6A18Q96N87 628 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 FCRL4Q96PJ5 515 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 AIF1LQ9BQI0 150 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 FRMD8P1Q9BZ68 369 aaPredicted RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 TBL1XR1Q9BZK7 514 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 FAM192AQ9GZU8 254 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 TP63Q9H3D4 680 aaPredicted RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 CPVLQ9H3G5 476 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 NT5MQ9NPB1 228 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 TBCCD1Q9NVR7 557 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 KLK13Q9UKR3 277 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 TCFL5Q9UL49 500 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SNX11Q9Y5W9 270 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SNX5Q9Y5X3 404 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 KIAA1671Q9BY89 1806 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 CITO14578 2027 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 ATG2AQ2TAZ0 1938 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 A0A1W2PQ27 194 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 A0A1W2PQ64 194 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 A0A1W2PQC6 194 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 A0A1W2PQH9 124 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 CFAP73A6NFT4 308 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 BCKDKO14874 412 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 ZBTB39O15060 712 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 MID1O15344 667 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 HRO43593 1189 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 CYTH3O43739 400 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 E2F6O75461 281 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 CLDN14O95500 239 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 CD3EP07766 207 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SLC35E2P0CK97 266 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 RPS3P23396 243 aaKnown RBP eCLIP3.47□□□□□ -1.859e-7■■■■□ 19.3
TOP2A-201ENST00000423485 MMP15P51511 669 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 DSCR9P59020 149 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 AP1S1P61966 158 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 PRKG2Q13237 762 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 IL18R1Q13478 541 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 MELKQ14680 651 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 KRT72Q14CN4 511 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 TRMT5Q32P41 509 aaKnown RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 CDKAL1Q5VV42 579 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 LILRA6Q6PI73 481 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 NLRC3Q7RTR2 1065 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 HDXQ7Z353 690 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 ZNF572Q7Z3I7 529 aaPredicted RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SLFN11Q7Z7L1 901 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SAMD14Q8IZD0 417 aaPredicted RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 IL17DQ8TAD2 202 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 INPP5DQ92835 1189 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 MTFMTQ96DP5 389 aaKnown RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 PLEKHA8Q96JA3 519 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 B3GALT6Q96L58 329 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 PLEKHG4BQ96PX9 1271 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SLC4A5Q9BY07 1137 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 ELL3Q9HB65 397 aaPredicted RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 MRPS30Q9NP92 439 aaKnown RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 CCNB1IP1Q9NPC3 277 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 HSPBP1Q9NZL4 362 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 PLAAQ9Y263 795 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 ADAM18Q9Y3Q7 739 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 PDCD11Q14690 1871 aaKnown RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 TCF20Q9UGU0 1960 aaKnown RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 PIKFYVEQ9Y2I7 2098 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 A0A1B0GTH6 734 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SMIM28A0A1B0GU29 152 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 ALOX15BO15296 676 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 NMT2O60551 498 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 TULP3O75386 442 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 GIMD1P0DJR0 217 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 ENDOUP21128 410 aaKnown RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SYT1P21579 422 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 MC3RP41968 323 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SKIV2L2P42285 1042 aaKnown RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 NOVP48745 357 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 EPHB4P54760 987 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 CDC20Q12834 499 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 ATP1A4Q13733 1029 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 STX1AQ16623 288 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 RTP2Q5QGT7 225 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 PRAMEF14Q5SWL7 426 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 CCNJQ5T5M9 372 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SHEQ5VZ18 495 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 ARHGAP17Q68EM7 881 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SHC4Q6S5L8 630 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 GLT6D1Q7Z4J2 308 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SFR1Q86XK3 245 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 ZNF808Q8N4W9 903 aaPredicted RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 GALNT6Q8NCL4 622 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 DENND6BQ8NEG7 585 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 OR10H5Q8NGA6 315 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 RFWD2Q8NHY2 731 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SLC2A14Q8TDB8 520 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 RAB8BQ92930 207 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms