RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 C1RP00736 705 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 HOXC6P09630 235 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 L1CAMP32004 1257 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 GLUD2P49448 558 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 TBRG1Q3YBR2 411 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 CAND1Q86VP6 1230 aaKnown RBP12.12□□□□□ -0.47
CLCN4-203ENST00000421085 SLC35B2Q8TB61 432 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 CERKQ8TCT0 537 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 C5orf34Q96MH7 638 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 CGREF1Q99674 301 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 TFB2MQ9H5Q4 396 aaKnown RBP12.12□□□□□ -0.47
CLCN4-203ENST00000421085 FKBPLQ9UIM3 349 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 ADAMTS13Q76LX8 1427 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 OR2AG2A6NM03 316 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 PDPK1O15530 556 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 CSN2P05814 226 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 DGKZQ13574 1117 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 IRAK1BP1Q5VVH5 260 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 OR2T5Q6IEZ7 315 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 TMEM53Q6P2H8 277 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 OR2T29Q8NH02 315 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 ZNF420Q8TAQ5 688 aaPredicted RBP12.12□□□□□ -0.47
CLCN4-203ENST00000421085 TRPM4Q8TD43 1214 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 CCDC107Q8WV48 283 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 PHOX2BQ99453 314 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 LGR4Q9BXB1 951 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 GDAP2Q9NXN4 497 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 MYOCOSA0A1B0GUC4 107 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 L7N2F9 121 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 FBP2O00757 339 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 SLC9A3R1O14745 358 aaPredicted RBP12.12□□□□□ -0.47
CLCN4-203ENST00000421085 CYP3A5P20815 502 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 RBM34P42696 430 aaKnown RBP12.12□□□□□ -0.47
CLCN4-203ENST00000421085 RPS3AP61247 264 aaKnown RBP12.12□□□□□ -0.47
CLCN4-203ENST00000421085 OCLNQ16625 522 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 CRB2Q5IJ48 1285 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 TNFAIP8L2Q6P589 184 aaPredicted RBP12.12□□□□□ -0.47
CLCN4-203ENST00000421085 SLC2A7Q6PXP3 512 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 CYP2U1Q7Z449 544 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 C1orf216Q8TAB5 229 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.12□□□□□ -0.47
CLCN4-203ENST00000421085 TRPV4Q9HBA0 871 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 RUVBL1Q9Y265 456 aaKnown RBP12.12□□□□□ -0.47
CLCN4-203ENST00000421085 ARL5AQ9Y689 179 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 FAM159BA6NKW6 160 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 H0YGN5 161 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 M0R036 132 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 SIX3O95343 332 aaPredicted RBP12.12□□□□□ -0.47
CLCN4-203ENST00000421085 RLN2P04090 185 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 RPS3P23396 243 aaKnown RBP eCLIP12.12□□□□□ -0.47
CLCN4-203ENST00000421085 CRYBB1P53674 252 aaPredicted RBP12.12□□□□□ -0.47
CLCN4-203ENST00000421085 TAF10Q12962 218 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 ZNF423Q2M1K9 1284 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 CLEC12AQ5QGZ9 265 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 KIAA0930Q6ICG6 404 aaPredicted RBP12.12□□□□□ -0.47
CLCN4-203ENST00000421085 ZNF627Q7L945 461 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 KLHL6Q8WZ60 621 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 ZSWIM3Q96MP5 696 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 ANKHQ9HCJ1 492 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 POFUT2Q9Y2G5 429 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 NFS1Q9Y697 457 aa12.12□□□□□ -0.47
CLCN4-203ENST00000421085 ELK4P28324 431 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 RYKP34925 604 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 EIF5AP63241 154 aaKnown RBP12.11□□□□□ -0.47
CLCN4-203ENST00000421085 RAB39AQ14964 217 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 TMEM44Q2T9K0 475 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 PRAMEF19Q5SWL8 479 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 FAM182AQ5T1J6 154 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 UBE2Q1Q7Z7E8 422 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 PLCZ1Q86YW0 608 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 ASCC1Q8N9N2 400 aaKnown RBP12.11□□□□□ -0.47
CLCN4-203ENST00000421085 C7orf57Q8NEG2 295 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 RPF2Q9H7B2 306 aaKnown RBP12.11□□□□□ -0.47
CLCN4-203ENST00000421085 ITM2CQ9NQX7 267 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 MEMO1Q9Y316 297 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 JCADQ9P266 1359 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 A8MT66 165 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 PRKACGP22612 351 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 STT3AP46977 705 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 NDUFV1P49821 464 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 FKBP1AP62942 108 aaKnown RBP12.11□□□□□ -0.47
CLCN4-203ENST00000421085 CRY2Q49AN0 593 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 NOL9Q5SY16 702 aaKnown RBP12.11□□□□□ -0.47
CLCN4-203ENST00000421085 BRSK1Q8TDC3 778 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 BIRC7Q96CA5 298 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 MYOCQ99972 504 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 KXD1Q9BQD3 176 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 ASAH2Q9NR71 780 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 MED31Q9Y3C7 131 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 PCDHAC2Q9Y5I4 1007 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 SH3D21A4FU49 640 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 CDK14O94921 469 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 ESR1P03372 595 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 CSF2P04141 144 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 GNAO1P09471 354 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 HTR7P34969 479 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 DGKQP52824 942 aa12.11□□□□□ -0.47
CLCN4-203ENST00000421085 AURKBQ96GD4 344 aaPredicted RBP12.11□□□□□ -0.47
CLCN4-203ENST00000421085 CNDP2Q96KP4 475 aaKnown RBP12.11□□□□□ -0.47
CLCN4-203ENST00000421085 GTPBP2Q9BX10 602 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms