RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 LBPP18428 481 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 MAP4P27816 1152 aaKnown RBP20.41■□□□□ 0.86
GPC1-202ENST00000420138 ACSL1P33121 698 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 ARL1P40616 181 aaPredicted RBP20.41■□□□□ 0.86
GPC1-202ENST00000420138 TPMTP51580 245 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 SLC25A3Q00325 362 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 PRKCQQ04759 706 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 ABRAXAS2Q15018 415 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 KIAA1324Q6UXG2 1013 aaKnown RBP20.41■□□□□ 0.86
GPC1-202ENST00000420138 AMZ2Q86W34 360 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 KLHDC8AQ8IYD2 350 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 SPDYE1Q8NFV5 336 aaPredicted RBP20.41■□□□□ 0.86
GPC1-202ENST00000420138 ZDHHC5Q9C0B5 715 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 CIDEBQ9UHD4 219 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 NCKAP1Q9Y2A7 1128 aa20.41■□□□□ 0.86
GPC1-202ENST00000420138 C10orf142B7Z368 130 aa20.4■□□□□ 0.86
GPC1-202ENST00000420138 CHRNB1P11230 501 aa20.4■□□□□ 0.86
GPC1-202ENST00000420138 MYCLP1P12525 358 aaPredicted RBP20.4■□□□□ 0.86
GPC1-202ENST00000420138 GPX3P22352 226 aa20.4■□□□□ 0.86
GPC1-202ENST00000420138 IMPA1P29218 277 aa20.4■□□□□ 0.86
GPC1-202ENST00000420138 KPNB1Q14974 876 aaKnown RBP20.4■□□□□ 0.86
GPC1-202ENST00000420138 RNF165Q6ZSG1 346 aa20.4■□□□□ 0.86
GPC1-202ENST00000420138 SNX31Q8N9S9 440 aa20.4■□□□□ 0.86
GPC1-202ENST00000420138 FOPNLQ96NB1 174 aa20.4■□□□□ 0.86
GPC1-202ENST00000420138 RTKNQ9BST9 563 aa20.4■□□□□ 0.86
GPC1-202ENST00000420138 THTPAQ9BU02 230 aa20.4■□□□□ 0.86
GPC1-202ENST00000420138 PHPT1Q9NRX4 125 aaPredicted RBP20.4■□□□□ 0.86
GPC1-202ENST00000420138 INTS7Q9NVH2 962 aaKnown RBP20.4■□□□□ 0.86
GPC1-202ENST00000420138 EBF1Q9UH73 591 aa20.4■□□□□ 0.86
GPC1-202ENST00000420138 FBXL21Q9UKT6 434 aa20.4■□□□□ 0.86
GPC1-202ENST00000420138 DNMT3AQ9Y6K1 912 aaPredicted RBP20.4■□□□□ 0.86
GPC1-202ENST00000420138 TRIOO75962 3097 aa20.39■□□□□ 0.86
GPC1-202ENST00000420138 KCNE1BA0A087WTH5 132 aa20.39■□□□□ 0.86
GPC1-202ENST00000420138 PABPN1LA6NDY0 278 aaKnown RBP20.39■□□□□ 0.86
GPC1-202ENST00000420138 GPR89AB7ZAQ6 455 aa20.39■□□□□ 0.86
GPC1-202ENST00000420138 SLC31A1O15431 190 aa20.39■□□□□ 0.86
GPC1-202ENST00000420138 SLC16A8O95907 504 aa20.39■□□□□ 0.86
GPC1-202ENST00000420138 GPR89BP0CG08 455 aa20.39■□□□□ 0.86
GPC1-202ENST00000420138 ACADMP11310 421 aa20.39■□□□□ 0.86
GPC1-202ENST00000420138 ITGAXP20702 1163 aa20.39■□□□□ 0.86
GPC1-202ENST00000420138 ITPKAP23677 461 aa20.39■□□□□ 0.86
GPC1-202ENST00000420138 CCR3P51677 355 aa20.39■□□□□ 0.86
GPC1-202ENST00000420138 CYLC2Q14093 348 aaPredicted RBP20.39■□□□□ 0.86
GPC1-202ENST00000420138 TMEM31Q5JXX7 168 aa20.39■□□□□ 0.86
GPC1-202ENST00000420138 AGTRAPQ6RW13 159 aa20.39■□□□□ 0.86
GPC1-202ENST00000420138 IL27RAQ6UWB1 636 aa20.39■□□□□ 0.86
GPC1-202ENST00000420138 SFRP1Q8N474 314 aa20.39■□□□□ 0.86
GPC1-202ENST00000420138 HBEGFQ99075 208 aa20.39■□□□□ 0.86
GPC1-202ENST00000420138 MRGBPQ9NV56 204 aa20.39■□□□□ 0.86
GPC1-202ENST00000420138 DNAJC11Q9NVH1 559 aa20.39■□□□□ 0.86
GPC1-202ENST00000420138 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.39■□□□□ 0.86
GPC1-202ENST00000420138 PSMD12O00232 456 aaPredicted RBP20.39■□□□□ 0.85
GPC1-202ENST00000420138 CIB2O75838 187 aa20.39■□□□□ 0.85
GPC1-202ENST00000420138 CLDN9O95484 217 aa20.39■□□□□ 0.85
GPC1-202ENST00000420138 CEACAM5P06731 702 aa20.39■□□□□ 0.85
GPC1-202ENST00000420138 RPA4Q13156 261 aa20.39■□□□□ 0.85
GPC1-202ENST00000420138 METRNLQ641Q3 311 aa20.39■□□□□ 0.85
GPC1-202ENST00000420138 GK5Q6ZS86 529 aa20.39■□□□□ 0.85
GPC1-202ENST00000420138 NET1Q7Z628 596 aaPredicted RBP20.39■□□□□ 0.85
GPC1-202ENST00000420138 FUNDC1Q8IVP5 155 aa20.39■□□□□ 0.85
GPC1-202ENST00000420138 ULK2Q8IYT8 1036 aa20.39■□□□□ 0.85
GPC1-202ENST00000420138 OR9I1Q8NGQ6 314 aa20.39■□□□□ 0.85
GPC1-202ENST00000420138 OR56A3Q8NH54 315 aa20.39■□□□□ 0.85
GPC1-202ENST00000420138 C1QTNF7Q9BXJ2 289 aa20.39■□□□□ 0.85
GPC1-202ENST00000420138 FARSBQ9NSD9 589 aaKnown RBP20.39■□□□□ 0.85
GPC1-202ENST00000420138 WNT16Q9UBV4 365 aa20.39■□□□□ 0.85
GPC1-202ENST00000420138 SLC17A4Q9Y2C5 497 aa20.39■□□□□ 0.85
GPC1-202ENST00000420138 NUMA1Q14980 2115 aa20.38■□□□□ 0.85
GPC1-202ENST00000420138 FFAR3O14843 346 aa20.38■□□□□ 0.85
GPC1-202ENST00000420138 GPR42O15529 346 aa20.38■□□□□ 0.85
GPC1-202ENST00000420138 GNAZP19086 355 aa20.38■□□□□ 0.85
GPC1-202ENST00000420138 HMOX2P30519 316 aa20.38■□□□□ 0.85
GPC1-202ENST00000420138 ACADVLP49748 655 aa20.38■□□□□ 0.85
GPC1-202ENST00000420138 DIO3P55073 304 aa20.38■□□□□ 0.85
GPC1-202ENST00000420138 CUL3Q13618 768 aa20.38■□□□□ 0.85
GPC1-202ENST00000420138 FASTKQ14296 549 aaKnown RBP20.38■□□□□ 0.85
GPC1-202ENST00000420138 GGTA1PQ4G0N0 100 aa20.38■□□□□ 0.85
GPC1-202ENST00000420138 C6orf136Q5SQH8 315 aa20.38■□□□□ 0.85
GPC1-202ENST00000420138 C6orf163Q5TEZ5 329 aa20.38■□□□□ 0.85
GPC1-202ENST00000420138 PAOXQ6QHF9 649 aa20.38■□□□□ 0.85
GPC1-202ENST00000420138 L3MBTL4Q8NA19 623 aa20.38■□□□□ 0.85
GPC1-202ENST00000420138 WDR60Q8WVS4 1066 aa20.38■□□□□ 0.85
GPC1-202ENST00000420138 ATL1Q8WXF7 558 aa20.38■□□□□ 0.85
GPC1-202ENST00000420138 USP7Q93009 1102 aa20.38■□□□□ 0.85
GPC1-202ENST00000420138 OR4K3Q96R72 315 aa20.38■□□□□ 0.85
GPC1-202ENST00000420138 APOOQ9BUR5 198 aa20.38■□□□□ 0.85
GPC1-202ENST00000420138 ITM2CQ9NQX7 267 aa20.38■□□□□ 0.85
GPC1-202ENST00000420138 SDR39U1Q9NRG7 319 aaPredicted RBP20.38■□□□□ 0.85
GPC1-202ENST00000420138 MRPS17Q9Y2R5 130 aaKnown RBP20.38■□□□□ 0.85
GPC1-202ENST00000420138 GPR45Q9Y5Y3 372 aa20.38■□□□□ 0.85
GPC1-202ENST00000420138 KRBA1A5PL33 1030 aa20.37■□□□□ 0.85
GPC1-202ENST00000420138 C19orf67A6NJJ6 358 aa20.37■□□□□ 0.85
GPC1-202ENST00000420138 KMOO15229 486 aa20.37■□□□□ 0.85
GPC1-202ENST00000420138 MRPL19P49406 292 aaKnown RBP20.37■□□□□ 0.85
GPC1-202ENST00000420138 NAE1Q13564 534 aa20.37■□□□□ 0.85
GPC1-202ENST00000420138 SPATA19Q7Z5L4 167 aa20.37■□□□□ 0.85
GPC1-202ENST00000420138 PDZD3Q86UT5 571 aa20.37■□□□□ 0.85
GPC1-202ENST00000420138 THOC6Q86W42 341 aaKnown RBP20.37■□□□□ 0.85
GPC1-202ENST00000420138 TRIM69Q86WT6 500 aa20.37■□□□□ 0.85
GPC1-202ENST00000420138 ZNF480Q8WV37 535 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms