RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 SALL1Q9NSC2 1324 aa3.33□□□□□ -1.88
SDCBPP3-201ENST00000419629 UGGT1Q9NYU2 1555 aa3.33□□□□□ -1.88
SDCBPP3-201ENST00000419629 ZCCHC11Q5TAX3 1644 aaKnown RBP3.33□□□□□ -1.88
SDCBPP3-201ENST00000419629 ITSN1Q15811 1721 aa3.33□□□□□ -1.88
SDCBPP3-201ENST00000419629 IGLV5-37A0A075B6J1 123 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 A0A0B4J293 547 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 IQANK1A0A1B0GTG1 560 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 MACROD2A1Z1Q3 448 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 TRIM64CA6NLI5 447 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 LRRC53A6NM62 1247 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 SIGLEC16A6NMB1 481 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 EIF4E1BA6NMX2 242 aaKnown RBP3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 SYCE1LA8MT33 242 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 A8MUI8 341 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 CENPBD1B2RD01 187 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 GOLGA8MH3BSY2 632 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 BOLA2-SMG1P6H3BVE0 249 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 CCDC188H7C350 402 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 CPLX1O14810 134 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 TIMM23O14925 209 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 MCF2LO15068 1137 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 TIPRLO75663 272 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 ZWINTO95229 277 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 OXSR1O95747 527 aaPredicted RBP3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 AFPP02771 609 aaKnown RBP3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 MMP2P08253 660 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 HOXB5P09067 269 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 NUDT17P0C025 328 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 GGT5P36269 586 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 RPL5P46777 297 aaKnown RBP3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 GPC3P51654 580 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 HNRNPFP52597 415 aaKnown RBP3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 CLDN2P57739 230 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 NUP107P57740 925 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 NOP14P78316 857 aaKnown RBP3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 COG7P83436 770 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 ASPHQ12797 758 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 COASYQ13057 564 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 PNOCQ13519 176 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 NR1D2Q14995 579 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 TNIP1Q15025 636 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 CALCRLQ16602 461 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 SOWAHAQ2M3V2 549 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 C15orf59Q2T9L4 293 aaPredicted RBP3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 ZNF718Q3SXZ3 478 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 ANKDD1AQ495B1 522 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 FAM69AQ5T7M9 428 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 TWF2Q6IBS0 349 aaKnown RBP3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 NIPAL1Q6NVV3 410 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 FAM122CQ6P4D5 195 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 TTC23LQ6PF05 361 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 CLEC4GQ6UXB4 293 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 H1FNTQ75WM6 255 aaPredicted RBP3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 GSTA5Q7RTV2 222 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 ZC3HC1Q86WB0 502 aaKnown RBP3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 GRAMD2AQ8IUY3 354 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 KIF2BQ8N4N8 673 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 TMCO5AQ8N6Q1 288 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 PLD5Q8N7P1 536 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 ARRDC2Q8TBH0 407 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 TBC1D16Q8TBP0 767 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 SUN5Q8TC36 379 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 SCFD1Q8WVM8 642 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 NELFBQ8WX92 580 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 ZNF274Q96GC6 653 aaPredicted RBP3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 CFAP57Q96MR6 1250 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 BIRC8Q96P09 236 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 EPYCQ99645 322 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 OLFM1Q99784 485 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 HAUS8Q9BT25 410 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 SLC7A5P2Q9GIP4 190 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 DDX47Q9H0S4 455 aaKnown RBP3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 IL25Q9H293 177 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 TTYH1Q9H313 450 aaPredicted RBP3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 SH2D4AQ9H788 454 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 TLE6Q9H808 572 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 SLC38A10Q9HBR0 1119 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 ECHDC1Q9NTX5 307 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 COMMD8Q9NX08 183 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 CISD1Q9NZ45 108 aaKnown RBP3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 GGA3Q9NZ52 723 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 STX18Q9P2W9 335 aaKnown RBP3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 CNOT8Q9UFF9 292 aaKnown RBP3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 SEC63Q9UGP8 760 aaKnown RBP3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 STX8Q9UNK0 236 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 CRYL1Q9Y2S2 319 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 TIMM22Q9Y584 194 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 NFS1Q9Y697 457 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 UTYO14607 1347 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 CARMIL3Q8ND23 1372 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 TDRD9Q8NDG6 1382 aaKnown RBP3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 MED23Q9ULK4 1368 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 NCAPD2Q15021 1401 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 MRC2Q9UBG0 1479 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 MLH3Q9UHC1 1453 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 AGLP35573 1532 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 CEP170BQ9Y4F5 1589 aaPredicted RBP3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 MAP3K4Q9Y6R4 1608 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 CHD1O14646 1710 aa3.32□□□□□ -1.88
SDCBPP3-201ENST00000419629 IFT172Q9UG01 1749 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms