RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 NFATC2Q13469 925 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 METTL2BQ6P1Q9 378 aaKnown RBP11.72□□□□□ -0.53
PTPRF-205ENST00000414879 CBARPQ8N350 705 aaPredicted RBP11.72□□□□□ -0.53
PTPRF-205ENST00000414879 AMER2Q8N7J2 671 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 OR9A1PQ8NGU1 263 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 CYB5D2Q8WUJ1 264 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 HMGB4Q8WW32 186 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 LMLNQ96KR4 655 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 SEMA6AQ9H2E6 1030 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 UGT1A7Q9HAW7 530 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 UGT1A10Q9HAW8 530 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 UGT1A8Q9HAW9 530 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 CYTH4Q9UIA0 394 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 MYH4Q9Y623 1939 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 LRRC14BA6NHZ5 514 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 BEST1O76090 585 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 NR2F6P10588 404 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 CYP4F2P78329 520 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 GRIK2Q13002 908 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 TRIM16LQ309B1 348 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 KIAA1161Q6NSJ0 714 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 FAM13CQ8NE31 585 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 C10orf82Q8WW14 230 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 PPM1MQ96MI6 270 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 CASD1Q96PB1 797 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 NELL2Q99435 816 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 C1orf21Q9H246 121 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 CXorf56Q9H5V9 222 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 RMI1Q9H9A7 625 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 FAM120CQ9NX05 1096 aaKnown RBP11.72□□□□□ -0.53
PTPRF-205ENST00000414879 MOCS1Q9NZB8 636 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 SPATA7Q9P0W8 599 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 VGLL3A8MV65 326 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 GRID2O43424 1007 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 KRT36O76013 467 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 ALDH4A1P30038 563 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 CDK9P50750 372 aaKnown RBP11.72□□□□□ -0.53
PTPRF-205ENST00000414879 TSPAN14Q8NG11 270 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 SLC35G5Q96KT7 338 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 SYT11Q9BT88 431 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 BRINP2Q9C0B6 783 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 MVB12BQ9H7P6 319 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 CLK4Q9HAZ1 481 aaKnown RBP11.72□□□□□ -0.53
PTPRF-205ENST00000414879 NEUROD4Q9HD90 331 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 GTF2A1LQ9UNN4 478 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 NRXN2Q9P2S2 1712 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 CAPN8A6NHC0 703 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 TGM5O43548 720 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 ENTPD5O75356 428 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 ACP5P13686 325 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 C5AR1P21730 350 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 HMGCLP35914 325 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 CSNK1DP48730 415 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 PDK3Q15120 406 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 RAB41Q5JT25 222 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 ALKAL1Q6UXT8 129 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 FLCNQ8NFG4 579 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 MRGPRX2Q96LB1 330 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 DEPDC7Q96QD5 511 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 FADS2P1A8MWK0 482 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 ZBTB42B2RXF5 422 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 PLK4O00444 970 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 DLX3O60479 287 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 RPL4P36578 427 aaKnown RBP11.71□□□□□ -0.53
PTPRF-205ENST00000414879 USP46P62068 366 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 ZNF155Q12901 538 aaPredicted RBP11.71□□□□□ -0.53
PTPRF-205ENST00000414879 SLBPQ14493 270 aaKnown RBP eCLIP11.71□□□□□ -0.53
PTPRF-205ENST00000414879 DHCR24Q15392 516 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 IFI44LQ53G44 452 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 LIPJQ5W064 366 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 LPGAT1Q92604 370 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 GLYATL1Q969I3 302 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 ZNF382Q96SR6 550 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 SERHL2Q9H4I8 314 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 SERHLQ9NQF3 203 aa11.71□□□□□ -0.53
PTPRF-205ENST00000414879 LDOC1O95751 146 aaPredicted RBP11.71□□□□□ -0.54
PTPRF-205ENST00000414879 DUSP3P51452 185 aaPredicted RBP11.71□□□□□ -0.54
PTPRF-205ENST00000414879 CRISP3P54108 245 aa11.71□□□□□ -0.54
PTPRF-205ENST00000414879 WDR5P61964 334 aaKnown RBP11.71□□□□□ -0.54
PTPRF-205ENST00000414879 TXNL4AP83876 142 aaKnown RBP11.71□□□□□ -0.54
PTPRF-205ENST00000414879 TRAF3Q13114 568 aa11.71□□□□□ -0.54
PTPRF-205ENST00000414879 RUNX3Q13761 415 aa11.71□□□□□ -0.54
PTPRF-205ENST00000414879 NCEH1Q6PIU2 408 aa11.71□□□□□ -0.54
PTPRF-205ENST00000414879 FOXR1Q6PIV2 292 aa11.71□□□□□ -0.54
PTPRF-205ENST00000414879 PARGQ86W56 976 aa11.71□□□□□ -0.54
PTPRF-205ENST00000414879 C19orf18Q8NEA5 215 aa11.71□□□□□ -0.54
PTPRF-205ENST00000414879 SETD7Q8WTS6 366 aaKnown RBP11.71□□□□□ -0.54
PTPRF-205ENST00000414879 XAGE5Q8WWM1 108 aa11.71□□□□□ -0.54
PTPRF-205ENST00000414879 IGSF8Q969P0 613 aa11.71□□□□□ -0.54
PTPRF-205ENST00000414879 MOAP1Q96BY2 351 aa11.71□□□□□ -0.54
PTPRF-205ENST00000414879 ERLEC1Q96DZ1 483 aa11.71□□□□□ -0.54
PTPRF-205ENST00000414879 ABCG8Q9H221 673 aa11.71□□□□□ -0.54
PTPRF-205ENST00000414879 EBF3Q9H4W6 596 aa11.71□□□□□ -0.54
PTPRF-205ENST00000414879 USP3Q9Y6I4 520 aa11.71□□□□□ -0.54
PTPRF-205ENST00000414879 DRGXA6NNA5 263 aa11.71□□□□□ -0.54
PTPRF-205ENST00000414879 HEPACAM2A8MVW5 462 aa11.71□□□□□ -0.54
PTPRF-205ENST00000414879 COQ9O75208 318 aa11.71□□□□□ -0.54
PTPRF-205ENST00000414879 ARHGEF15O94989 841 aa11.71□□□□□ -0.54
PTPRF-205ENST00000414879 EDN1P05305 212 aa11.71□□□□□ -0.54
PTPRF-205ENST00000414879 EMX2Q04743 252 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms