RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 GAD1Q99259 594 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 ZFYVE16Q7Z3T8 1539 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 TRAV19A0A0A6YYK7 116 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 BHLHE40O14503 412 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 BCKDHAP12694 445 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 CERCAMQ5T4B2 595 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 PGM2L1Q6PCE3 622 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 LAS2Q8IYD9 372 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 TWIST2Q8WVJ9 160 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 SSU72Q9NP77 194 aaKnown RBP13.62□□□□□ -0.23
AFF3-202ENST00000409236 ZNF510Q9Y2H8 683 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 MIA3Q5JRA6 1907 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 IQGAP3Q86VI3 1631 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 GXYLT2A0PJZ3 443 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 GNB3P16520 340 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 CD6P30203 668 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 CHAF1BQ13112 559 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 IFI44LQ53G44 452 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 TATDN1Q6P1N9 297 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 NIPAL3Q6P499 406 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 COMMD7Q86VX2 200 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 ZDHHC21Q8IVQ6 265 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 HCAR2Q8TDS4 363 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 PHOX2BQ99453 314 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 POTEKPQ9BYX7 375 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 GPSM3Q9Y4H4 160 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 VSTM5A8MXK1 200 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 LCP2Q13094 533 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 ZNF404Q494X3 552 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 SLC9B2Q86UD5 537 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 BEST4Q8NFU0 473 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 MOAP1Q96BY2 351 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 MTG2Q9H4K7 406 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 NYAP2Q9P242 653 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 KIAA0100Q14667 2235 aaKnown RBP13.62□□□□□ -0.23
AFF3-202ENST00000409236 PEX14O75381 377 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 SNAP29O95721 258 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 HCKP08631 526 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 USP17L7P0C7H9 530 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 ATP5A1P25705 553 aaKnown RBP13.62□□□□□ -0.23
AFF3-202ENST00000409236 SREBF2Q12772 1141 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 TMEM53Q6P2H8 277 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 RPLP0P6Q8NHW5 317 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 ZBED6CLQ96FA7 236 aaPredicted RBP13.62□□□□□ -0.23
AFF3-202ENST00000409236 SAMD10Q9BYL1 202 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 TDRD3Q9H7E2 651 aaKnown RBP13.62□□□□□ -0.23
AFF3-202ENST00000409236 LRRC42Q9Y546 428 aa13.62□□□□□ -0.23
AFF3-202ENST00000409236 NEDD8-MDP1E9PL57 170 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 CXCR6O00574 342 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 MATN1P21941 496 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 ABCG1P45844 678 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 NT5DC1Q5TFE4 455 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 SPATA6LQ8N4H0 392 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 PEX13Q92968 403 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 C3orf49Q96BT1 292 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 PRMT6Q96LA8 375 aaPredicted RBP13.61□□□□□ -0.23
AFF3-202ENST00000409236 ARID1AO14497 2285 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 CCDC163A0A0D9SF12 145 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 ZNF705FA8MVS1 300 aaPredicted RBP13.61□□□□□ -0.23
AFF3-202ENST00000409236 DNAJB5O75953 348 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 TRUB2O95900 331 aaKnown RBP13.61□□□□□ -0.23
AFF3-202ENST00000409236 ZNF705DP0CH99 300 aaPredicted RBP13.61□□□□□ -0.23
AFF3-202ENST00000409236 ZNF705BP0CI00 300 aaPredicted RBP13.61□□□□□ -0.23
AFF3-202ENST00000409236 ANXA8P13928 327 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 SIRT2Q8IXJ6 389 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 OVCA2Q8WZ82 227 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 PREX2Q70Z35 1606 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 HYKKA2RU49 373 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 PAPD4Q6PIY7 484 aaKnown RBP13.61□□□□□ -0.23
AFF3-202ENST00000409236 USP51Q70EK9 711 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 ARHGAP20Q9P2F6 1191 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 PCTPQ9UKL6 214 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 CXCR3P49682 368 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 NDST1P52848 882 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 HTD2P86397 168 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 RAB31Q13636 194 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 DSG2Q14126 1118 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 EIF2B1Q14232 305 aaKnown RBP13.61□□□□□ -0.23
AFF3-202ENST00000409236 CARD16Q5EG05 197 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 JAGN1Q8N5M9 183 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 AP2A1O95782 977 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 CCND3P30281 292 aaPredicted RBP13.61□□□□□ -0.23
AFF3-202ENST00000409236 FMO3P31513 532 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 LAMTOR4Q0VGL1 99 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 ZER1Q7Z7L7 766 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 TRABD2AQ86V40 505 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 JPH3Q8WXH2 748 aaPredicted RBP13.61□□□□□ -0.23
AFF3-202ENST00000409236 TMED9Q9BVK6 235 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 TMEM100Q9NV29 134 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 HECW2Q9P2P5 1572 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 HTR3EA5X5Y0 456 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 CHATP28329 748 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 CLCN4P51793 760 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 OR5T2Q8NGG2 359 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 WNT8BQ93098 351 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 SLC7A8Q9UHI5 535 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 SHOX2O60902 331 aaPredicted RBP13.61□□□□□ -0.23
AFF3-202ENST00000409236 RGS9O75916 674 aaPredicted RBP13.61□□□□□ -0.23
AFF3-202ENST00000409236 GADD45GO95257 159 aa13.61□□□□□ -0.23
AFF3-202ENST00000409236 SNAPINO95295 136 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms