RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 TPSAB1Q15661 275 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 CRTC2Q53ET0 693 aaPredicted RBP5.75□□□□□ -1.49
HDAC9-203ENST00000406072 C1orf53Q5VUE5 145 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 STEAP3Q658P3 488 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 LIN54Q6MZP7 749 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 NT5DC4Q86YG4 428 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 CELF2-AS1Q8N7Q2 184 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 LSMEM1Q8N8F7 131 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 PHF10Q8WUB8 498 aaKnown RBP5.75□□□□□ -1.49
HDAC9-203ENST00000406072 SLC5A11Q8WWX8 675 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 TCEAL3Q969E4 200 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 FAM129BQ96TA1 746 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 LRRC3Q9BY71 257 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 SDCBP2Q9H190 292 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 FZD8Q9H461 694 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 RBM22Q9NW64 420 aaKnown RBP eCLIP5.75□□□□□ -1.49
HDAC9-203ENST00000406072 SLC39A1Q9NY26 324 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 NENFQ9UMX5 172 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 PCDHGB5Q9Y5G0 923 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 TRAV6A0A075B6T7 132 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 FAM159BA6NKW6 160 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 ZNF879B4DU55 563 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 SLC30A4O14863 429 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 ZBTB24O43167 697 aaPredicted RBP5.75□□□□□ -1.49
HDAC9-203ENST00000406072 SNNO75324 88 aaPredicted RBP5.75□□□□□ -1.49
HDAC9-203ENST00000406072 IL1BP01584 269 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 COL6A1P12109 1028 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 MLNP12872 115 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 UNGP13051 313 aaPredicted RBP5.75□□□□□ -1.49
HDAC9-203ENST00000406072 ITGA2P17301 1181 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 RAB3BP20337 219 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 AQP1P29972 269 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 MAP2K3P46734 347 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 ERVFC1P60507 584 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 TSPAN5P62079 268 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 RPL38P63173 70 aaKnown RBP5.75□□□□□ -1.49
HDAC9-203ENST00000406072 MRPS5P82675 430 aaKnown RBP5.75□□□□□ -1.49
HDAC9-203ENST00000406072 ARF5P84085 180 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 PTSQ03393 145 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 CACNB2Q08289 660 aaPredicted RBP5.75□□□□□ -1.49
HDAC9-203ENST00000406072 ZNF460Q14592 562 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 LAPTM4AQ15012 233 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 TSTQ16762 297 aaKnown RBP5.75□□□□□ -1.49
HDAC9-203ENST00000406072 HKDC1Q2TB90 917 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 ZACNQ401N2 412 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 SETMARQ53H47 684 aaPredicted RBP5.75□□□□□ -1.49
HDAC9-203ENST00000406072 NDUFAF5Q5TEU4 345 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 FAM205BPQ63HN1 556 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 C15orf39Q6ZRI6 1047 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 LAPTM4BQ86VI4 370 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 OXR1Q8N573 874 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 DCBLD1Q8N8Z6 715 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 C7orf57Q8NEG2 295 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 OR52J3Q8NH60 311 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 STAG3L4Q8TBR4 150 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 SCRN2Q96FV2 425 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 P2RY11Q96G91 374 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 SLC39A13Q96H72 371 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 TNIP3Q96KP6 325 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 MAGEB10Q96LZ2 347 aaPredicted RBP5.75□□□□□ -1.49
HDAC9-203ENST00000406072 ZFP3Q96NJ6 502 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 IL12RB2Q99665 862 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 C17orf62Q9BQA9 187 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 HERPUD2Q9BSE4 406 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 VRTNQ9H8Y1 702 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 FBRSL1Q9HCM7 1045 aaKnown RBP5.75□□□□□ -1.49
HDAC9-203ENST00000406072 HPF1Q9NWY4 346 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 SH3BP4Q9P0V3 963 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 TMEM181Q9P2C4 612 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 NLKQ9UBE8 527 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 TSPAN16Q9UKR8 245 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 TBC1D24Q9ULP9 559 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 MGAT4AQ9UM21 535 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 DERAQ9Y315 318 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 DNMT3AQ9Y6K1 912 aaPredicted RBP5.75□□□□□ -1.49
HDAC9-203ENST00000406072 NRCAMQ92823 1304 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 PATJQ8NI35 1801 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 AGAP5A6NIR3 686 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 ISM1B1AKI9 464 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 DISC1C4P0D8 188 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 SLC1A7O00341 560 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 DLGAP1O14490 977 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 MICAL2O94851 1124 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 DNTTP04053 509 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 LGALS2P05162 132 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 AKR1A1P14550 325 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 POU2F1P14859 743 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 PRKCHP24723 683 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 HOXD10P28358 340 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 RFC2P35250 354 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 ACADSBP45954 432 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 PPP3CCP48454 512 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 SPIBQ01892 262 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 CD47Q08722 323 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 DSG2Q14126 1118 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 SELPLGQ14242 412 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 TMEM132DQ14C87 1099 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 ACOX1Q15067 660 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 DEFB115Q30KQ5 88 aa5.75□□□□□ -1.49
HDAC9-203ENST00000406072 GPAT3Q53EU6 434 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms