RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 GRB7Q14451 532 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 ERICH5Q6P6B1 374 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 C17orf64Q86WR6 236 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 RAB43Q86YS6 212 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 CEP97Q8IW35 865 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 C7orf57Q8NEG2 295 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 ZFP28Q8NHY6 868 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 AP2M1Q96CW1 435 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 C11orf24Q96F05 449 aaPredicted RBP10.55□□□□□ -0.72
CCDC40-204ENST00000397545 MFSD1Q9H3U5 465 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 MAT2BQ9NZL9 334 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 KIAA1522Q9P206 1035 aaPredicted RBP10.55□□□□□ -0.72
CCDC40-204ENST00000397545 ZNF221Q9UK13 617 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 MAPRE3Q9UPY8 281 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 GPSM3Q9Y4H4 160 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 K7EPI3 171 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 PGRMC2O15173 223 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 GUCY1B2O75343 617 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 SLC35G4P0C7Q5 338 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 RPL3P39023 403 aaKnown RBP10.55□□□□□ -0.72
CCDC40-204ENST00000397545 CDH4P55283 916 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 SULT2A1Q06520 285 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 DNASE1L3Q13609 305 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 SULT1C3Q6IMI6 304 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 LYSMD3Q7Z3D4 306 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 PARGQ86W56 976 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 COMMD2Q86X83 199 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 DBF4BQ8NFT6 615 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 TMEM203Q969S6 136 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 KCNC2Q96PR1 638 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 TEFMQ96QE5 360 aaKnown RBP10.55□□□□□ -0.72
CCDC40-204ENST00000397545 CPQQ9Y646 472 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 XPNPEP2O43895 674 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 ITGBL1O95965 494 aaPredicted RBP10.55□□□□□ -0.72
CCDC40-204ENST00000397545 ELK4P28324 431 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 RAB25P57735 213 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 MCCD1P59942 119 aaPredicted RBP10.55□□□□□ -0.72
CCDC40-204ENST00000397545 GCNT6Q5T4J0 391 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 CXorf57Q6NSI4 855 aaKnown RBP10.55□□□□□ -0.72
CCDC40-204ENST00000397545 OR4F6Q8NGB9 312 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 OR5K1Q8NHB7 308 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 CSGALNACT1Q8TDX6 532 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 MRPL48Q96GC5 212 aaKnown RBP10.55□□□□□ -0.72
CCDC40-204ENST00000397545 KIFC1Q9BW19 673 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 OSBPL2Q9H1P3 480 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 FAM124BQ9H5Z6 455 aaPredicted RBP10.55□□□□□ -0.72
CCDC40-204ENST00000397545 INTS10Q9NVR2 710 aaKnown RBP10.55□□□□□ -0.72
CCDC40-204ENST00000397545 OSER1Q9NX31 292 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 TVP23BQ9NYZ1 205 aa10.55□□□□□ -0.72
CCDC40-204ENST00000397545 TCRBV5S1A1TA0A578 114 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 CLIC1O00299 241 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 KERAO60938 352 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 SLC35E2BP0CK96 405 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 CDH1P12830 882 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 VARSP26640 1264 aaKnown RBP10.54□□□□□ -0.72
CCDC40-204ENST00000397545 RCVRNP35243 200 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 MAPKAPK2P49137 400 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 DSC3Q14574 896 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 NDUFAF6Q330K2 333 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 NRG4Q8WWG1 115 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 TSPAN18Q96SJ8 248 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 SPATA5L1Q9BVQ7 753 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 HIPK3Q9H422 1215 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 IGFLR1Q9H665 355 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 TBC1D17Q9HA65 648 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 SMIM30A4D0T7 59 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 LOC730098B7Z3J9 87 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 FYNP06241 537 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 PRPS2P11908 318 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 HTR7P34969 479 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 BIKQ13323 160 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 TAF1AQ15573 450 aaPredicted RBP10.54□□□□□ -0.72
CCDC40-204ENST00000397545 C6orf183Q5T699 404 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 CYP2U1Q7Z449 544 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 ZNF438Q7Z4V0 828 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 CILP2Q8IUL8 1156 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 SVOPLQ8N434 492 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 ZFAND2BQ8WV99 257 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 RELTQ969Z4 430 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 ARMC5Q96C12 935 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 MIR1-1HGQ9H1L0 117 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 BTN3A3O00478 584 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 OAS1P00973 400 aaKnown RBP10.54□□□□□ -0.72
CCDC40-204ENST00000397545 PABPC4LP0CB38 370 aaKnown RBP10.54□□□□□ -0.72
CCDC40-204ENST00000397545 PRKAR1AP10644 381 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 ACADMP11310 421 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 SCNN1AP37088 669 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 NFKB2Q00653 900 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 MS4A2Q01362 244 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 TIGD6Q17RP2 521 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 CCDC157Q569K6 752 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 DCST1Q5T197 706 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 ZNF730Q6ZMV8 503 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 USP30Q70CQ3 517 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 PDPRQ8NCN5 879 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 OR5AK3PQ8NH89 298 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 C16orf70Q9BSU1 422 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 DCSTAMPQ9H295 470 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 AASDHPPTQ9NRN7 309 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 ZNFX1Q9P2E3 1918 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms