RNA–Protein interactions for RNA: ENST00000396595.7

LIMCH1-203, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-203ENST00000396595 NTAN1Q96AB6 310 aa10.08□□□□□ -0.8
LIMCH1-203ENST00000396595 ERVK-6Q9BXR3 956 aa10.08□□□□□ -0.8
LIMCH1-203ENST00000396595 BRINP2Q9C0B6 783 aa10.08□□□□□ -0.8
LIMCH1-203ENST00000396595 C1orf21Q9H246 121 aa10.08□□□□□ -0.8
LIMCH1-203ENST00000396595 TBCCD1Q9NVR7 557 aa10.08□□□□□ -0.8
LIMCH1-203ENST00000396595 PADI2Q9Y2J8 665 aa10.08□□□□□ -0.8
LIMCH1-203ENST00000396595 RPL36Q9Y3U8 105 aaKnown RBP10.08□□□□□ -0.8
LIMCH1-203ENST00000396595 PCDHA2Q9Y5H9 948 aa10.08□□□□□ -0.8
LIMCH1-203ENST00000396595 IQCF5A8MTL0 148 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 CENPBD1B2RD01 187 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 SCNN1AP37088 669 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 OR7D4Q8NG98 312 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 RNF31Q96EP0 1072 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 C11orf16Q9NQ32 467 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 MAP10Q9P2G4 905 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 UPB1Q9UBR1 384 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 PCDHGC4Q9Y5F7 938 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 MAU2Q9Y6X3 613 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 TOR1BO14657 336 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 UGT1A9O60656 530 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 RSL1D1O76021 490 aaKnown RBP10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 SPARCP09486 303 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 OR4Q2P0C623 313 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 CD36P16671 472 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 CKMT2P17540 419 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 XRCC1P18887 633 aaPredicted RBP10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 IDSP22304 550 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 SLC6A4P31645 630 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 GRK5P34947 590 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 RORCP51449 518 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 LILRA4P59901 499 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 RANBP3LQ86VV4 465 aaPredicted RBP10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 SLITRK4Q8IW52 837 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 SMG8Q8ND04 991 aaKnown RBP10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 TSEN15Q8WW01 171 aaKnown RBP10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 PCED1BQ96HM7 432 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 PIWIL1Q96J94 861 aaKnown RBP10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 FEM1CQ96JP0 617 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 CLCC1Q96S66 551 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 TMEM209Q96SK2 561 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 RNF208Q9H0X6 261 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 DPEP3Q9H4B8 488 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 UGT1A7Q9HAW7 530 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 UGT1A10Q9HAW8 530 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 UGT1A8Q9HAW9 530 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 EVA1BQ9NVM1 165 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 TMEM59LQ9UK28 342 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 PLIN4Q96Q06 1357 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 NEDD8-MDP1E9PL57 170 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 NOBOXO60393 691 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 AOC1P19801 751 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 CCNFP41002 786 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 TIGD6Q17RP2 521 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 IQCCQ4KMZ1 466 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 NOL9Q5SY16 702 aaKnown RBP10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 LBX2Q6XYB7 198 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 FRRS1Q6ZNA5 592 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 SIDT2Q8NBJ9 832 aaKnown RBP10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 SMG7Q92540 1137 aaKnown RBP10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 CDADC1Q9BWV3 514 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 PPM1HQ9ULR3 514 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 FAM159BA6NKW6 160 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 K7EPI3 171 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 KMOO15229 486 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 CYP11A1P05108 521 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 GIMD1P0DJR0 217 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 NSG1P42857 185 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 YAP1P46937 504 aaKnown RBP10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 FOXM1Q08050 763 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 KLHDC10Q6PID8 442 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 CRTC1Q6UUV9 634 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 ZNF574Q6ZN55 896 aaPredicted RBP10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 TMEM192Q8IY95 271 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 CANT1Q8WVQ1 401 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 TRIM43Q96BQ3 446 aaPredicted RBP10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 C12orf43Q96C57 262 aaKnown RBP10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 KLRG1Q96E93 195 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 KCNS3Q9BQ31 491 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 CHIAQ9BZP6 476 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 POLR2J2Q9GZM3 115 aaKnown RBP10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 XPNPEP1Q9NQW7 623 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 RIPK3Q9Y572 518 aa10.07□□□□□ -0.8
LIMCH1-203ENST00000396595 ILVBLA1L0T0 632 aa10.06□□□□□ -0.8
LIMCH1-203ENST00000396595 PPEF2O14830 753 aa10.06□□□□□ -0.8
LIMCH1-203ENST00000396595 PDPK1O15530 556 aa10.06□□□□□ -0.8
LIMCH1-203ENST00000396595 NPY5RQ15761 445 aa10.06□□□□□ -0.8
LIMCH1-203ENST00000396595 GPR153Q6NV75 609 aa10.06□□□□□ -0.8
LIMCH1-203ENST00000396595 RGL4Q8IZJ4 473 aa10.06□□□□□ -0.8
LIMCH1-203ENST00000396595 BBS1Q8NFJ9 593 aa10.06□□□□□ -0.8
LIMCH1-203ENST00000396595 NEK7Q8TDX7 302 aa10.06□□□□□ -0.8
LIMCH1-203ENST00000396595 DUSP26Q9BV47 211 aa10.06□□□□□ -0.8
LIMCH1-203ENST00000396595 EBPLQ9BY08 206 aa10.06□□□□□ -0.8
LIMCH1-203ENST00000396595 SSX4O60224 188 aa10.06□□□□□ -0.8
LIMCH1-203ENST00000396595 CTNNB1P35222 781 aa10.06□□□□□ -0.8
LIMCH1-203ENST00000396595 ASPAP45381 313 aa10.06□□□□□ -0.8
LIMCH1-203ENST00000396595 DGKZQ13574 1117 aa10.06□□□□□ -0.8
LIMCH1-203ENST00000396595 CRY2Q49AN0 593 aa10.06□□□□□ -0.8
LIMCH1-203ENST00000396595 TMEM198Q66K66 360 aa10.06□□□□□ -0.8
LIMCH1-203ENST00000396595 SLC24A5Q71RS6 500 aa10.06□□□□□ -0.8
LIMCH1-203ENST00000396595 SNX20Q7Z614 316 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms