RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 PER2O15055 1255 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 GPR182O15218 404 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 IRAK2O43187 625 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 B3GAT3O94766 335 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 APOA1P02647 267 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 ZNF235Q14590 738 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 PRAMEF19Q5SWL8 479 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 GDPD3Q7L5L3 318 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 LRRC49Q8IUZ0 686 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 NLGN4XQ8N0W4 816 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 OR4F6Q8NGB9 312 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 YIPF6Q96EC8 236 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 CDKN2AIPNLQ96HQ2 116 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 CEP19Q96LK0 163 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 DEPDC7Q96QD5 511 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 EGFL8Q99944 293 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 NUAK2Q9H093 628 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 RERGLQ9H628 205 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 PLSCR3Q9NRY6 295 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 ABCG2Q9UNQ0 655 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 TESMINQ9Y4I5 508 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 N6AMT1Q9Y5N5 214 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 ALPK3Q96L96 1907 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 M0R129 80 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 GPR32O75388 356 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 HPRP00739 348 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 POMCP01189 267 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 CCDC159P0C7I6 412 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 MSH3P20585 1137 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 GRK4P32298 578 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 ACVRL1P37023 503 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 HSPA7P48741 367 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 DAPP51397 102 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 DGKEP52429 567 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 OR2B6P58173 313 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 TAB1Q15750 504 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 SMUG1Q53HV7 270 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 SNAP47Q5SQN1 464 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 VTCN1Q7Z7D3 282 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 PGBD5Q8N414 524 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 SVOPLQ8N434 492 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 LIX1Q8N485 282 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 PARP16Q8N5Y8 322 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 RTL3Q8N8U3 475 aaKnown RBP9.63□□□□□ -0.87
TRIM39-203ENST00000396547 ISG20Q96AZ6 181 aaKnown RBP9.63□□□□□ -0.87
TRIM39-203ENST00000396547 RHBDF1Q96CC6 855 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 CLIP3Q96DZ5 547 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 TPD52L3Q96J77 140 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 CITED4Q96RK1 184 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 BRINP2Q9C0B6 783 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 OR51E2Q9H255 320 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 MIOSQ9NXC5 875 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 ZNF221Q9UK13 617 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 MIA3Q5JRA6 1907 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 SLC12A8A0AV02 714 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 HHLA1C9JL84 531 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 MGEA5O60502 916 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 RPP40O75818 363 aaKnown RBP9.63□□□□□ -0.87
TRIM39-203ENST00000396547 MMP2P08253 660 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 SLC35A2P78381 396 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 CREMQ03060 361 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 PRKCZQ05513 592 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 EFEMP1Q12805 493 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 TAPT1Q6NXT6 567 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 HORMAD1Q86X24 394 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 CFAP52Q8N1V2 620 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 DEPDC4Q8N2C3 294 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 ZNF548Q8NEK5 533 aaPredicted RBP9.63□□□□□ -0.87
TRIM39-203ENST00000396547 TSPEARQ8WU66 669 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 PHF10Q8WUB8 498 aaKnown RBP9.63□□□□□ -0.87
TRIM39-203ENST00000396547 PGAP3Q96FM1 320 aaPredicted RBP9.63□□□□□ -0.87
TRIM39-203ENST00000396547 REXO5Q96IC2 774 aaKnown RBP9.63□□□□□ -0.87
TRIM39-203ENST00000396547 KCNC2Q96PR1 638 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 NMUR1Q9HB89 426 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 CPNE5Q9HCH3 593 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 EXOSC4Q9NPD3 245 aaKnown RBP9.63□□□□□ -0.87
TRIM39-203ENST00000396547 GIMAP4Q9NUV9 329 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 THG1LQ9NWX6 298 aaKnown RBP9.63□□□□□ -0.87
TRIM39-203ENST00000396547 SLC25A37Q9NYZ2 338 aa9.63□□□□□ -0.87
TRIM39-203ENST00000396547 SAMHD1Q9Y3Z3 626 aaKnown RBP9.63□□□□□ -0.87
TRIM39-203ENST00000396547 A0A1W2PQH9 124 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 DYTNA2CJ06 578 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 MROH6A6NGR9 719 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 AGAP5A6NIR3 686 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 TREHO43280 583 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 RPS17P08708 135 aaKnown RBP9.62□□□□□ -0.87
TRIM39-203ENST00000396547 CTSHP09668 335 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 AQP1P29972 269 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 KRT20P35900 424 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 IDH2P48735 452 aaKnown RBP9.62□□□□□ -0.87
TRIM39-203ENST00000396547 SCNN1GP51170 649 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 STC1P52823 247 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 GBX1Q14549 363 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 ACOX1Q15067 660 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 TRIM60Q495X7 471 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 TIGD5Q53EQ6 642 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 SETD9Q8NE22 299 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 PPTC7Q8NI37 304 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 RHEBL1Q8TAI7 183 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 GTF2H4Q92759 462 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms