RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 RNF215Q9Y6U7 377 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 TTC26A0AVF1 554 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 CLCA1A8K7I4 914 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 LMO7DNF2Z398 122 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 GTPBP1O00178 669 aaKnown RBP5.36□□□□□ -1.55
AP3S1-202ENST00000395548 PIRO00625 290 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 CPLX1O14810 134 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 MGST3O14880 152 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 CASC3O15234 703 aaKnown RBP5.36□□□□□ -1.55
AP3S1-202ENST00000395548 SPTLC2O15270 562 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 SLC7A4O43246 635 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 PROM1O43490 865 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 ASNA1O43681 348 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 SLITRK3O94933 977 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 SCGB1D1O95968 90 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 ADRB2P07550 413 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 CXCL8P10145 99 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 CCL4P13236 92 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 STMN1P16949 149 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 LMO1P25800 156 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 YWHAQP27348 245 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 ANXA11P50995 505 aaKnown RBP5.36□□□□□ -1.55
AP3S1-202ENST00000395548 ST8SIA6P61647 398 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 IFI35P80217 286 aaPredicted RBP5.36□□□□□ -1.55
AP3S1-202ENST00000395548 SPAG1Q07617 926 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 CEBPEQ15744 281 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 SNX30Q5VWJ9 437 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 RRAGBQ5VZM2 374 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 ARL6IP4Q66PJ3 421 aaKnown RBP5.36□□□□□ -1.55
AP3S1-202ENST00000395548 ISM2Q6H9L7 571 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 NCAPH2Q6IBW4 605 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 CCDC91Q7Z6B0 441 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 SDCCAG8Q86SQ7 713 aaPredicted RBP5.36□□□□□ -1.55
AP3S1-202ENST00000395548 TMEM86AQ8N2M4 240 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 TBCKQ8TEA7 893 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 ART4Q93070 314 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 SDCCAG3Q96C92 435 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 FBXL20Q96IG2 436 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 KLHL32Q96NJ5 620 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 PPP1R9BQ96SB3 815 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 VRK1Q99986 396 aaPredicted RBP5.36□□□□□ -1.55
AP3S1-202ENST00000395548 ZPBPQ9BS86 351 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 IMPG2Q9BZV3 1241 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 CCDC177Q9NQR7 707 aaPredicted RBP5.36□□□□□ -1.55
AP3S1-202ENST00000395548 DDX43Q9NXZ2 648 aaKnown RBP5.36□□□□□ -1.55
AP3S1-202ENST00000395548 SLC39A1Q9NY26 324 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 CTTNBP2NLQ9P2B4 639 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 RCOR3Q9P2K3 495 aaPredicted RBP5.36□□□□□ -1.55
AP3S1-202ENST00000395548 DDX25Q9UHL0 483 aaKnown RBP5.36□□□□□ -1.55
AP3S1-202ENST00000395548 IPO11Q9UI26 975 aaKnown RBP5.36□□□□□ -1.55
AP3S1-202ENST00000395548 DDX19BQ9UMR2 479 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 CITO14578 2027 aa5.36□□□□□ -1.55
AP3S1-202ENST00000395548 VPS13CQ709C8 3753 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 HIVEP2P31629 2446 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 KPNA7A9QM74 516 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 E7ENX8 843 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 M0QYT0 321 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 FCHO1O14526 889 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 PPEF2O14830 753 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 ZW10O43264 779 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 TOM1L1O75674 476 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 DNAJB5O75953 348 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 TSPAN9O75954 239 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 ACTL6BO94805 426 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 TDP2O95551 362 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 LY6G6DO95868 133 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 DLDP09622 509 aaKnown RBP5.35□□□□□ -1.55
AP3S1-202ENST00000395548 FGF3P11487 239 aaPredicted RBP5.35□□□□□ -1.55
AP3S1-202ENST00000395548 IL11P20809 199 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 AGAP20933 346 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 HNRNPA2B1P22626 353 aaKnown RBP5.35□□□□□ -1.55
AP3S1-202ENST00000395548 LHX1P48742 406 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 CCL11P51671 97 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 POU6F2P78424 691 aaPredicted RBP5.35□□□□□ -1.55
AP3S1-202ENST00000395548 TAP2Q03519 686 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 CHAF1BQ13112 559 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 MAMLD1Q13495 774 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 TRA2AQ13595 282 aaKnown RBP eCLIP5.35□□□□□ -1.55
AP3S1-202ENST00000395548 HLXQ14774 488 aaPredicted RBP5.35□□□□□ -1.55
AP3S1-202ENST00000395548 C16orf72Q14CZ0 275 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 PTPRRQ15256 657 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 CLPPQ16740 277 aaPredicted RBP5.35□□□□□ -1.55
AP3S1-202ENST00000395548 PFKFB3Q16875 520 aaPredicted RBP5.35□□□□□ -1.55
AP3S1-202ENST00000395548 CD300EQ496F6 205 aaPredicted RBP5.35□□□□□ -1.55
AP3S1-202ENST00000395548 PDLIM3Q53GG5 364 aaPredicted RBP5.35□□□□□ -1.55
AP3S1-202ENST00000395548 TMEM215Q68D42 235 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 Q6ZSR6 202 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 MICALCLQ6ZW33 695 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 BBS12Q6ZW61 710 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 UNC13DQ70J99 1090 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 ABI3BPQ7Z7G0 1075 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 PIM3Q86V86 326 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 ARMC8Q8IUR7 673 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 MMAAQ8IVH4 418 aaKnown RBP5.35□□□□□ -1.55
AP3S1-202ENST00000395548 CD302Q8IX05 232 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 CFAP52Q8N1V2 620 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 RBMXL3Q8N7X1 1067 aaKnown RBP5.35□□□□□ -1.55
AP3S1-202ENST00000395548 AVL9Q8NBF6 648 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 CCDC148Q8NFR7 591 aa5.35□□□□□ -1.55
AP3S1-202ENST00000395548 CREB3L4Q8TEY5 395 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms