RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 OTUD4Q01804 1114 aaKnown RBP20.34■□□□□ 0.85
TRAF4-203ENST00000394925 AIMP2Q13155 320 aaKnown RBP20.34■□□□□ 0.85
TRAF4-203ENST00000394925 KCNMB4Q86W47 210 aa20.34■□□□□ 0.85
TRAF4-203ENST00000394925 DNAJC22Q8N4W6 341 aa20.34■□□□□ 0.85
TRAF4-203ENST00000394925 CCDC110Q8TBZ0 833 aa20.34■□□□□ 0.85
TRAF4-203ENST00000394925 ACTL9Q8TC94 416 aa20.34■□□□□ 0.85
TRAF4-203ENST00000394925 SLC22A11Q9NSA0 550 aa20.34■□□□□ 0.85
TRAF4-203ENST00000394925 SMARCAL1Q9NZC9 954 aa20.34■□□□□ 0.85
TRAF4-203ENST00000394925 FBXL4Q9UKA2 621 aa20.34■□□□□ 0.85
TRAF4-203ENST00000394925 PLAGL1Q9UM63 463 aa20.34■□□□□ 0.85
TRAF4-203ENST00000394925 NOVA2Q9UNW9 492 aaKnown RBP20.34■□□□□ 0.85
TRAF4-203ENST00000394925 PLCL2Q9UPR0 1127 aa20.34■□□□□ 0.85
TRAF4-203ENST00000394925 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.34■□□□□ 0.85
TRAF4-203ENST00000394925 ISM1B1AKI9 464 aa20.33■□□□□ 0.85
TRAF4-203ENST00000394925 LIN7AO14910 233 aaPredicted RBP20.33■□□□□ 0.85
TRAF4-203ENST00000394925 LRRTM2O43300 516 aa20.33■□□□□ 0.85
TRAF4-203ENST00000394925 CBFA2T2O43439 604 aa20.33■□□□□ 0.85
TRAF4-203ENST00000394925 STK10O94804 968 aaKnown RBP20.33■□□□□ 0.85
TRAF4-203ENST00000394925 GSTM1P09488 218 aa20.33■□□□□ 0.85
TRAF4-203ENST00000394925 TPBGLP0DKB5 382 aa20.33■□□□□ 0.85
TRAF4-203ENST00000394925 HADHBP55084 474 aaKnown RBP20.33■□□□□ 0.85
TRAF4-203ENST00000394925 GSTM4Q03013 218 aa20.33■□□□□ 0.85
TRAF4-203ENST00000394925 DBN1Q16643 649 aa20.33■□□□□ 0.85
TRAF4-203ENST00000394925 NAPRTQ6XQN6 538 aa20.33■□□□□ 0.85
TRAF4-203ENST00000394925 CDKL3Q8IVW4 592 aaPredicted RBP20.33■□□□□ 0.85
TRAF4-203ENST00000394925 FAM20CQ8IXL6 584 aa20.33■□□□□ 0.85
TRAF4-203ENST00000394925 PIANPQ8IYJ0 282 aa20.33■□□□□ 0.85
TRAF4-203ENST00000394925 TBC1D21Q8IYX1 336 aa20.33■□□□□ 0.85
TRAF4-203ENST00000394925 SLC34A3Q8N130 599 aa20.33■□□□□ 0.85
TRAF4-203ENST00000394925 ELMO1Q92556 727 aa20.33■□□□□ 0.85
TRAF4-203ENST00000394925 FAM118BQ9BPY3 351 aa20.33■□□□□ 0.85
TRAF4-203ENST00000394925 ARNT2Q9HBZ2 717 aa20.33■□□□□ 0.85
TRAF4-203ENST00000394925 SLC6A20Q9NP91 592 aa20.33■□□□□ 0.85
TRAF4-203ENST00000394925 OR6C2Q9NZP2 312 aa20.33■□□□□ 0.85
TRAF4-203ENST00000394925 POLG2Q9UHN1 485 aa20.33■□□□□ 0.85
TRAF4-203ENST00000394925 OSGIN2Q9Y236 505 aa20.33■□□□□ 0.85
TRAF4-203ENST00000394925 PRSS21Q9Y6M0 314 aa20.33■□□□□ 0.85
TRAF4-203ENST00000394925 APCP25054 2843 aa20.32■□□□□ 0.84
TRAF4-203ENST00000394925 H7C0S8 307 aa20.32■□□□□ 0.84
TRAF4-203ENST00000394925 AP2A2O94973 939 aa20.32■□□□□ 0.84
TRAF4-203ENST00000394925 RBP3P10745 1247 aa20.32■□□□□ 0.84
TRAF4-203ENST00000394925 ACADLP28330 430 aa20.32■□□□□ 0.84
TRAF4-203ENST00000394925 EIF3EP60228 445 aaKnown RBP20.32■□□□□ 0.84
TRAF4-203ENST00000394925 PRAMEF13Q5VWM6 474 aa20.32■□□□□ 0.84
TRAF4-203ENST00000394925 DARS2Q6PI48 645 aaKnown RBP20.32■□□□□ 0.84
TRAF4-203ENST00000394925 DNAJB14Q8TBM8 379 aa20.32■□□□□ 0.84
TRAF4-203ENST00000394925 GRHL3Q8TE85 626 aa20.32■□□□□ 0.84
TRAF4-203ENST00000394925 PPP4R1Q8TF05 950 aa20.32■□□□□ 0.84
TRAF4-203ENST00000394925 SPATA13Q96N96 652 aa20.32■□□□□ 0.84
TRAF4-203ENST00000394925 NLE1Q9NVX2 485 aaPredicted RBP20.32■□□□□ 0.84
TRAF4-203ENST00000394925 FEZ2Q9UHY8 353 aaPredicted RBP20.32■□□□□ 0.84
TRAF4-203ENST00000394925 CDC23Q9UJX2 597 aa20.32■□□□□ 0.84
TRAF4-203ENST00000394925 TPH1P17752 444 aa20.31■□□□□ 0.84
TRAF4-203ENST00000394925 MMP11P24347 488 aa20.31■□□□□ 0.84
TRAF4-203ENST00000394925 CTNNA2P26232 953 aa20.31■□□□□ 0.84
TRAF4-203ENST00000394925 PEBP1P30086 187 aaKnown RBP20.31■□□□□ 0.84
TRAF4-203ENST00000394925 MAGEA1P43355 309 aa20.31■□□□□ 0.84
TRAF4-203ENST00000394925 PER3P56645 1201 aa20.31■□□□□ 0.84
TRAF4-203ENST00000394925 CACNG1Q06432 222 aa20.31■□□□□ 0.84
TRAF4-203ENST00000394925 SLC5A12Q1EHB4 618 aa20.31■□□□□ 0.84
TRAF4-203ENST00000394925 AGAP7PQ5VUJ5 663 aa20.31■□□□□ 0.84
TRAF4-203ENST00000394925 TTLL10Q6ZVT0 673 aa20.31■□□□□ 0.84
TRAF4-203ENST00000394925 TMTC1Q8IUR5 882 aa20.31■□□□□ 0.84
TRAF4-203ENST00000394925 VSTM4Q8IW00 320 aa20.31■□□□□ 0.84
TRAF4-203ENST00000394925 OR5K2Q8NHB8 316 aa20.31■□□□□ 0.84
TRAF4-203ENST00000394925 LRRC45Q96CN5 670 aa20.31■□□□□ 0.84
TRAF4-203ENST00000394925 CDKN2AIPNLQ96HQ2 116 aa20.31■□□□□ 0.84
TRAF4-203ENST00000394925 CNDP1Q96KN2 507 aa20.31■□□□□ 0.84
TRAF4-203ENST00000394925 AGAP4Q96P64 663 aa20.31■□□□□ 0.84
TRAF4-203ENST00000394925 EURLQ9NYK6 297 aa20.31■□□□□ 0.84
TRAF4-203ENST00000394925 TFR2Q9UP52 801 aa20.31■□□□□ 0.84
TRAF4-203ENST00000394925 KLHL20Q9Y2M5 609 aa20.31■□□□□ 0.84
TRAF4-203ENST00000394925 ARHGAP10A1A4S6 786 aa20.3■□□□□ 0.84
TRAF4-203ENST00000394925 E2F3O00716 465 aa20.3■□□□□ 0.84
TRAF4-203ENST00000394925 ITGAXP20702 1163 aa20.3■□□□□ 0.84
TRAF4-203ENST00000394925 NSG1P42857 185 aa20.3■□□□□ 0.84
TRAF4-203ENST00000394925 CDC16Q13042 620 aa20.3■□□□□ 0.84
TRAF4-203ENST00000394925 KIR2DS3Q14952 304 aa20.3■□□□□ 0.84
TRAF4-203ENST00000394925 IRAK1BP1Q5VVH5 260 aa20.3■□□□□ 0.84
TRAF4-203ENST00000394925 OVCH1Q7RTY7 1134 aa20.3■□□□□ 0.84
TRAF4-203ENST00000394925 DLG3Q92796 817 aa20.3■□□□□ 0.84
TRAF4-203ENST00000394925 MARVELD3Q96A59 401 aa20.3■□□□□ 0.84
TRAF4-203ENST00000394925 NACC2Q96BF6 587 aa20.3■□□□□ 0.84
TRAF4-203ENST00000394925 PPP1R2P1Q96PQ5 205 aa20.3■□□□□ 0.84
TRAF4-203ENST00000394925 CCDC78A2IDD5 438 aa20.29■□□□□ 0.84
TRAF4-203ENST00000394925 BHMG1C9JSJ3 638 aaPredicted RBP20.29■□□□□ 0.84
TRAF4-203ENST00000394925 SOCS6O14544 535 aa20.29■□□□□ 0.84
TRAF4-203ENST00000394925 HNRNPRO43390 633 aaKnown RBP20.29■□□□□ 0.84
TRAF4-203ENST00000394925 AP2A1O95782 977 aa20.29■□□□□ 0.84
TRAF4-203ENST00000394925 FTH1P02794 183 aa20.29■□□□□ 0.84
TRAF4-203ENST00000394925 MAGP20916 626 aa20.29■□□□□ 0.84
TRAF4-203ENST00000394925 TSFMP43897 325 aaKnown RBP20.29■□□□□ 0.84
TRAF4-203ENST00000394925 COPS2P61201 443 aa20.29■□□□□ 0.84
TRAF4-203ENST00000394925 POU6F1Q14863 301 aa20.29■□□□□ 0.84
TRAF4-203ENST00000394925 ZRSR2Q15696 482 aaKnown RBP20.29■□□□□ 0.84
TRAF4-203ENST00000394925 SYTL3Q4VX76 610 aa20.29■□□□□ 0.84
TRAF4-203ENST00000394925 IGFL2Q6UWQ7 119 aa20.29■□□□□ 0.84
TRAF4-203ENST00000394925 MCATQ8IVS2 390 aaKnown RBP20.29■□□□□ 0.84
TRAF4-203ENST00000394925 PARP9Q8IXQ6 854 aa20.29■□□□□ 0.84
TRAF4-203ENST00000394925 FAR1Q8WVX9 515 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms