RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 ALDH9A1P49189 494 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 TMBIM6P55061 237 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 Q6ZSR9 355 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 ADCK2Q7Z695 626 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 DBF4BQ8NFT6 615 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 NELL1Q92832 810 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 SUV39H1O43463 412 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 UGT2B11O75310 529 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 IGSF6O95976 241 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 CHRM5P08912 532 aaPredicted RBP15.79■□□□□ 0.12
PCDH1-203ENST00000394536 ATP6V1E1P36543 226 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 RELAQ04206 551 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 PRR23BQ6ZRT6 265 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 ACDQ96AP0 544 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 MS4A4AQ96JQ5 239 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 KATNBL1Q9H079 304 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 FNIP2Q9P278 1114 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 SLC22A14Q9Y267 594 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 CLIC1O00299 241 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 AIREO43918 545 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 CYP7B1O75881 506 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 FABP3P05413 133 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 RPS17P08708 135 aaKnown RBP15.79■□□□□ 0.12
PCDH1-203ENST00000394536 IMPDH2P12268 514 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 COLEC12Q5KU26 742 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 PDPRQ8NCN5 879 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 CD200R1Q8TD46 325 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 TMEM159Q96B96 161 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 ATP13A3Q9H7F0 1226 aa15.79■□□□□ 0.12
PCDH1-203ENST00000394536 PNMA8CA0A1B0GUJ8 204 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 SNPHO15079 494 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 TRBC1P01850 177 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 UGT2B4P06133 528 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 NCS1P62166 190 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 PON2Q15165 354 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 USP39Q53GS9 565 aaKnown RBP15.78■□□□□ 0.12
PCDH1-203ENST00000394536 SERINC5Q86VE9 423 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 SPARTQ8N0X7 666 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 TBC1D15Q8TC07 691 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 MRPS31Q92665 395 aaKnown RBP15.78■□□□□ 0.12
PCDH1-203ENST00000394536 UPF1Q92900 1129 aaKnown RBP eCLIP15.78■□□□□ 0.12
PCDH1-203ENST00000394536 POPDC3Q9HBV1 291 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 MAGEE1Q9HCI5 957 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 MTMR11A4FU01 709 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 GLTPD2A6NH11 291 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 ZNF623O75123 536 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 SOX6P35712 828 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 CCL23P55773 120 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 FPGSQ05932 587 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 PHKG1Q16816 387 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 DCDC5Q6ZRR9 648 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 DDX53Q86TM3 631 aaKnown RBP15.78■□□□□ 0.12
PCDH1-203ENST00000394536 CLIP4Q8N3C7 705 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 HDAC2Q92769 488 aaKnown RBP15.78■□□□□ 0.12
PCDH1-203ENST00000394536 KCNC2Q96PR1 638 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 COPS4Q9BT78 406 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 DHRS7Q9Y394 339 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 POLR2AP24928 1970 aaKnown RBP15.78■□□□□ 0.12
PCDH1-203ENST00000394536 EFCAB9A8MZ26 197 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 BCKDHAP12694 445 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 ENGP17813 658 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 SPIBQ01892 262 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 DMPKQ09013 629 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 NAE1Q13564 534 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 RAPSNQ13702 412 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 OR2T5Q6IEZ7 315 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 DUS1LQ6P1R4 473 aaKnown RBP15.78■□□□□ 0.12
PCDH1-203ENST00000394536 ARL14EPQ8N8R7 260 aaPredicted RBP15.78■□□□□ 0.12
PCDH1-203ENST00000394536 GLB1L3Q8NCI6 653 aaPredicted RBP15.78■□□□□ 0.12
PCDH1-203ENST00000394536 OR2T29Q8NH02 315 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 ZFYVE19Q96K21 471 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 MARCH7Q9H992 704 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 EHD3Q9NZN3 535 aa15.78■□□□□ 0.12
PCDH1-203ENST00000394536 MMP2P08253 660 aa15.77■□□□□ 0.12
PCDH1-203ENST00000394536 ARMC4Q5T2S8 1044 aa15.77■□□□□ 0.12
PCDH1-203ENST00000394536 VTCN1Q7Z7D3 282 aa15.77■□□□□ 0.12
PCDH1-203ENST00000394536 IGFN1Q86VF2 1251 aa15.77■□□□□ 0.12
PCDH1-203ENST00000394536 SLC22A16Q86VW1 577 aa15.77■□□□□ 0.12
PCDH1-203ENST00000394536 NETO1Q8TDF5 533 aa15.77■□□□□ 0.12
PCDH1-203ENST00000394536 PYURFQ96I23 114 aa15.77■□□□□ 0.12
PCDH1-203ENST00000394536 SMAD5Q99717 465 aaKnown RBP15.77■□□□□ 0.12
PCDH1-203ENST00000394536 DPH2Q9BQC3 489 aaPredicted RBP15.77■□□□□ 0.12
PCDH1-203ENST00000394536 ACAT2Q9BWD1 397 aa15.77■□□□□ 0.12
PCDH1-203ENST00000394536 MOSPD1Q9UJG1 213 aa15.77■□□□□ 0.12
PCDH1-203ENST00000394536 RAB23Q9ULC3 237 aa15.77■□□□□ 0.12
PCDH1-203ENST00000394536 PTPRFP10586 1907 aa15.77■□□□□ 0.12
PCDH1-203ENST00000394536 SLC1A7O00341 560 aa15.77■□□□□ 0.12
PCDH1-203ENST00000394536 TFECO14948 347 aaPredicted RBP15.77■□□□□ 0.12
PCDH1-203ENST00000394536 CYP27C1Q4G0S4 372 aa15.77■□□□□ 0.12
PCDH1-203ENST00000394536 ADGRF1Q5T601 910 aa15.77■□□□□ 0.12
PCDH1-203ENST00000394536 TTC23LQ6PF05 361 aa15.77■□□□□ 0.12
PCDH1-203ENST00000394536 FBXO22Q8NEZ5 403 aa15.77■□□□□ 0.12
PCDH1-203ENST00000394536 PROX1Q92786 737 aa15.77■□□□□ 0.12
PCDH1-203ENST00000394536 GIN1Q9NXP7 522 aa15.77■□□□□ 0.12
PCDH1-203ENST00000394536 SSC5DA1L4H1 1573 aa15.77■□□□□ 0.11
PCDH1-203ENST00000394536 COL11A1P12107 1806 aaPredicted RBP15.77■□□□□ 0.11
PCDH1-203ENST00000394536 M0QZQ0 153 aa15.77■□□□□ 0.11
PCDH1-203ENST00000394536 MANBAO00462 879 aa15.77■□□□□ 0.11
PCDH1-203ENST00000394536 PQBP1O60828 265 aaKnown RBP15.77■□□□□ 0.11
PCDH1-203ENST00000394536 RPLP2P05387 115 aaKnown RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms