RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 HALP42357 657 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 HTR6P50406 440 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 NME5P56597 212 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 PRKCQQ04759 706 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 RPA4Q13156 261 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 CYLC2Q14093 348 aaPredicted RBP8.41□□□□□ -1.06
TDP1-203ENST00000393454 SQLEQ14534 574 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 ZRSR2Q15696 482 aaKnown RBP8.41□□□□□ -1.06
TDP1-203ENST00000393454 CHSY3Q70JA7 882 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 THOC6Q86W42 341 aaKnown RBP8.41□□□□□ -1.06
TDP1-203ENST00000393454 RASGRP3Q8IV61 690 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 RBM15BQ8NDT2 890 aaKnown RBP8.41□□□□□ -1.06
TDP1-203ENST00000393454 PHC3Q8NDX5 983 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 TSTD1Q8NFU3 115 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 FBXO27Q8NI29 283 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 ASB12Q8WXK4 309 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 MTFMTQ96DP5 389 aaKnown RBP8.41□□□□□ -1.06
TDP1-203ENST00000393454 HBEGFQ99075 208 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 CADM1Q9BY67 442 aaKnown RBP8.41□□□□□ -1.06
TDP1-203ENST00000393454 OR52A5Q9H2C5 316 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 ZNF385DQ9H6B1 395 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 MRPL40Q9NQ50 206 aaKnown RBP8.41□□□□□ -1.06
TDP1-203ENST00000393454 PRDM6Q9NQX0 595 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 EBF1Q9UH73 591 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 CYP8B1Q9UNU6 501 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 TDRKHQ9Y2W6 561 aaKnown RBP8.41□□□□□ -1.06
TDP1-203ENST00000393454 POM121BA6NF01 834 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 FAM170BA6NMN3 283 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 SCAMP1O15126 338 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 GSC2O15499 205 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 LATO43561 262 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 ULK1O75385 1050 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 FUCA1P04066 466 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 CEACAM5P06731 702 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 SLC35G4P0C7Q5 338 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 CD1EP15812 388 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 ACADLP28330 430 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 ADSLP30566 484 aaPredicted RBP8.41□□□□□ -1.06
TDP1-203ENST00000393454 GNPDA1P46926 289 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 PFN3P60673 137 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 FASTKQ14296 549 aaKnown RBP8.41□□□□□ -1.06
TDP1-203ENST00000393454 ABRAXAS2Q15018 415 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 CPSF6Q16630 551 aaKnown RBP eCLIP8.41□□□□□ -1.06
TDP1-203ENST00000393454 ATP6AP1LQ52LC2 224 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 AGKQ53H12 422 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 ENPP7Q6UWV6 458 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 XKR5Q6UX68 686 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 SYT13Q7L8C5 426 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 PDZD3Q86UT5 571 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 TRIM69Q86WT6 500 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 SYTL1Q8IYJ3 562 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 SYNPOQ8N3V7 929 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 OXR1Q8N573 874 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 OR9A1PQ8NGU1 263 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 OR2T11Q8NH01 316 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 MAGEC3Q8TD91 643 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 TFGQ92734 400 aaPredicted RBP8.41□□□□□ -1.06
TDP1-203ENST00000393454 SHDQ96IW2 340 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 HHIPQ96QV1 700 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 MIPEPQ99797 713 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 CCT7Q99832 543 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 FOXQ1Q9C009 403 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 ZDHHC5Q9C0B5 715 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 MRGBPQ9NV56 204 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 INTS7Q9NVH2 962 aaKnown RBP8.41□□□□□ -1.06
TDP1-203ENST00000393454 TRPS1Q9UHF7 1281 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 SUFUQ9UMX1 484 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 PLEKHM1Q9Y4G2 1056 aa8.41□□□□□ -1.06
TDP1-203ENST00000393454 CFAP20Q9Y6A4 193 aaKnown RBP8.41□□□□□ -1.06
TDP1-203ENST00000393454 KANSL1LA0AUZ9 987 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 KRBA1A5PL33 1030 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 H0Y8X5 98 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 MANBAO00462 879 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 AIM2O14862 343 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 KRT6AP02538 564 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 KRT6BP04259 564 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 ALDOCP09972 364 aaKnown RBP8.4□□□□□ -1.06
TDP1-203ENST00000393454 EPORP19235 508 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 HNRNPA2B1P22626 353 aaKnown RBP8.4□□□□□ -1.06
TDP1-203ENST00000393454 IMPA1P29218 277 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 AKT2P31751 481 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 PGM1P36871 562 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 KRT6CP48668 564 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 CLCNKAP51800 687 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 ELF3P78545 371 aaPredicted RBP8.4□□□□□ -1.06
TDP1-203ENST00000393454 SLC25A3Q00325 362 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 IRF8Q02556 426 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 CHIT1Q13231 466 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 PRKG2Q13237 762 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 NR6A1Q15406 480 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 IMPG1Q17R60 797 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 DNAL1Q4LDG9 190 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 XKR7Q5GH72 579 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 XKR6Q5GH73 641 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 PRPF38BQ5VTL8 546 aaKnown RBP8.4□□□□□ -1.06
TDP1-203ENST00000393454 METRNLQ641Q3 311 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 UNC5DQ6UXZ4 953 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 GK5Q6ZS86 529 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 RD3Q7Z3Z2 195 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 SPATA19Q7Z5L4 167 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms