RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 MTMR14Q8NCE2 650 aa16.03■□□□□ 0.16
PHTF1-205ENST00000393357 OR6K2Q8NGY2 324 aa16.03■□□□□ 0.16
PHTF1-205ENST00000393357 ZNF300Q96RE9 604 aaPredicted RBP16.03■□□□□ 0.16
PHTF1-205ENST00000393357 EBPLQ9BY08 206 aa16.03■□□□□ 0.16
PHTF1-205ENST00000393357 BTBD3Q9Y2F9 522 aa16.03■□□□□ 0.16
PHTF1-205ENST00000393357 TESMINQ9Y4I5 508 aa16.03■□□□□ 0.16
PHTF1-205ENST00000393357 BNIP3LO60238 219 aa16.02■□□□□ 0.16
PHTF1-205ENST00000393357 CHRNB1P11230 501 aa16.02■□□□□ 0.16
PHTF1-205ENST00000393357 TBRG1Q3YBR2 411 aa16.02■□□□□ 0.16
PHTF1-205ENST00000393357 LRRTM3Q86VH5 581 aa16.02■□□□□ 0.16
PHTF1-205ENST00000393357 DNASE1L2Q92874 299 aa16.02■□□□□ 0.16
PHTF1-205ENST00000393357 CDKN2AIPNLQ96HQ2 116 aa16.02■□□□□ 0.16
PHTF1-205ENST00000393357 MALT1Q9UDY8 824 aa16.02■□□□□ 0.16
PHTF1-205ENST00000393357 FKBPLQ9UIM3 349 aa16.02■□□□□ 0.16
PHTF1-205ENST00000393357 RNF6Q9Y252 685 aa16.02■□□□□ 0.16
PHTF1-205ENST00000393357 KLHL20Q9Y2M5 609 aa16.02■□□□□ 0.16
PHTF1-205ENST00000393357 NINQ8N4C6 2090 aa16.02■□□□□ 0.16
PHTF1-205ENST00000393357 MIA3Q5JRA6 1907 aa16.02■□□□□ 0.16
PHTF1-205ENST00000393357 SLC7A4O43246 635 aa16.02■□□□□ 0.16
PHTF1-205ENST00000393357 ZW10O43264 779 aa16.02■□□□□ 0.16
PHTF1-205ENST00000393357 OR1E1P30953 314 aa16.02■□□□□ 0.16
PHTF1-205ENST00000393357 SLC14A1Q13336 389 aa16.02■□□□□ 0.16
PHTF1-205ENST00000393357 TIGD5Q53EQ6 642 aa16.02■□□□□ 0.16
PHTF1-205ENST00000393357 ZNF621Q6ZSS3 439 aa16.02■□□□□ 0.16
PHTF1-205ENST00000393357 GLT6D1Q7Z4J2 308 aa16.02■□□□□ 0.16
PHTF1-205ENST00000393357 TRNT1Q96Q11 434 aaKnown RBP16.02■□□□□ 0.16
PHTF1-205ENST00000393357 LATS2Q9NRM7 1088 aa16.02■□□□□ 0.16
PHTF1-205ENST00000393357 RAD18Q9NS91 495 aa16.02■□□□□ 0.16
PHTF1-205ENST00000393357 A0A0D9SEW6 157 aa16.02■□□□□ 0.15
PHTF1-205ENST00000393357 PCDHGA12O60330 932 aa16.02■□□□□ 0.15
PHTF1-205ENST00000393357 KERAO60938 352 aa16.02■□□□□ 0.15
PHTF1-205ENST00000393357 C7P10643 843 aa16.02■□□□□ 0.15
PHTF1-205ENST00000393357 CDKN2CP42773 168 aa16.02■□□□□ 0.15
PHTF1-205ENST00000393357 PWP1Q13610 501 aa16.02■□□□□ 0.15
PHTF1-205ENST00000393357 KYAT1Q16773 422 aa16.02■□□□□ 0.15
PHTF1-205ENST00000393357 PM20D1Q6GTS8 502 aa16.02■□□□□ 0.15
PHTF1-205ENST00000393357 ASCC1Q8N9N2 400 aaKnown RBP16.02■□□□□ 0.15
PHTF1-205ENST00000393357 OR5K1Q8NHB7 308 aa16.02■□□□□ 0.15
PHTF1-205ENST00000393357 SMARCD1Q96GM5 515 aa16.02■□□□□ 0.15
PHTF1-205ENST00000393357 COQ7Q99807 217 aa16.02■□□□□ 0.15
PHTF1-205ENST00000393357 AARSD1Q9BTE6 412 aaKnown RBP16.02■□□□□ 0.15
PHTF1-205ENST00000393357 MFSD1Q9H3U5 465 aa16.02■□□□□ 0.15
PHTF1-205ENST00000393357 ABCB9Q9NP78 766 aa16.02■□□□□ 0.15
PHTF1-205ENST00000393357 NUFIP1Q9UHK0 495 aaKnown RBP16.02■□□□□ 0.15
PHTF1-205ENST00000393357 WBP11Q9Y2W2 641 aaKnown RBP16.02■□□□□ 0.15
PHTF1-205ENST00000393357 TRIM64BA6NI03 449 aa16.01■□□□□ 0.15
PHTF1-205ENST00000393357 AGAP5A6NIR3 686 aa16.01■□□□□ 0.15
PHTF1-205ENST00000393357 SMLR1H3BR10 107 aa16.01■□□□□ 0.15
PHTF1-205ENST00000393357 STAU1O95793 577 aaKnown RBP16.01■□□□□ 0.15
PHTF1-205ENST00000393357 PGRP06401 933 aa16.01■□□□□ 0.15
PHTF1-205ENST00000393357 SDHBP21912 280 aa16.01■□□□□ 0.15
PHTF1-205ENST00000393357 GBX1Q14549 363 aa16.01■□□□□ 0.15
PHTF1-205ENST00000393357 EFL1Q7Z2Z2 1120 aaKnown RBP16.01■□□□□ 0.15
PHTF1-205ENST00000393357 BEND7Q8N7W2 519 aaPredicted RBP16.01■□□□□ 0.15
PHTF1-205ENST00000393357 PAPD5Q8NDF8 572 aaKnown RBP16.01■□□□□ 0.15
PHTF1-205ENST00000393357 RHBDF1Q96CC6 855 aa16.01■□□□□ 0.15
PHTF1-205ENST00000393357 SMAD5Q99717 465 aaKnown RBP16.01■□□□□ 0.15
PHTF1-205ENST00000393357 RPRD1BQ9NQG5 326 aaKnown RBP16.01■□□□□ 0.15
PHTF1-205ENST00000393357 ZNF639Q9UID6 485 aa16.01■□□□□ 0.15
PHTF1-205ENST00000393357 IRAK2O43187 625 aa16.01■□□□□ 0.15
PHTF1-205ENST00000393357 MED26O95402 600 aa16.01■□□□□ 0.15
PHTF1-205ENST00000393357 GRK4P32298 578 aa16.01■□□□□ 0.15
PHTF1-205ENST00000393357 OR1E2P47887 323 aa16.01■□□□□ 0.15
PHTF1-205ENST00000393357 HNRNPFP52597 415 aaKnown RBP16.01■□□□□ 0.15
PHTF1-205ENST00000393357 RPP38P78345 283 aaKnown RBP16.01■□□□□ 0.15
PHTF1-205ENST00000393357 SCAPQ12770 1279 aa16.01■□□□□ 0.15
PHTF1-205ENST00000393357 SLAMF1Q13291 335 aa16.01■□□□□ 0.15
PHTF1-205ENST00000393357 ARHGEF7Q14155 803 aa16.01■□□□□ 0.15
PHTF1-205ENST00000393357 PTCHD3Q3KNS1 767 aa16.01■□□□□ 0.15
PHTF1-205ENST00000393357 CYP2U1Q7Z449 544 aa16.01■□□□□ 0.15
PHTF1-205ENST00000393357 GALNT13Q8IUC8 556 aa16.01■□□□□ 0.15
PHTF1-205ENST00000393357 STX19Q8N4C7 294 aa16.01■□□□□ 0.15
PHTF1-205ENST00000393357 ZNF548Q8NEK5 533 aaPredicted RBP16.01■□□□□ 0.15
PHTF1-205ENST00000393357 MYO10Q9HD67 2058 aa16.01■□□□□ 0.15
PHTF1-205ENST00000393357 CCDC159P0C7I6 412 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 HOXD8P13378 290 aaPredicted RBP16■□□□□ 0.15
PHTF1-205ENST00000393357 PNPLA4P41247 253 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 SLC35A2P78381 396 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 GALNT1Q10472 559 aaPredicted RBP16■□□□□ 0.15
PHTF1-205ENST00000393357 PIK3R6Q5UE93 754 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 ELMOD1Q8N336 334 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 OR7D4Q8NG98 312 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 SPPL2AQ8TCT8 520 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 MAL2Q969L2 176 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 IGSF8Q969P0 613 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 KIAA1191Q96A73 305 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 SYTL2Q9HCH5 934 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 RANGRFQ9HD47 186 aaPredicted RBP16■□□□□ 0.15
PHTF1-205ENST00000393357 SLC6A14Q9UN76 642 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 DARSP14868 501 aaKnown RBP16■□□□□ 0.15
PHTF1-205ENST00000393357 CTPS1P17812 591 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 SCNN1AP37088 669 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 IL2P60568 153 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 TWF1Q12792 350 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 ARMC12Q5T9G4 340 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 TIGD7Q6NT04 549 aaPredicted RBP16■□□□□ 0.15
PHTF1-205ENST00000393357 PAMR1Q6UXH9 720 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 LINGO4Q6UY18 593 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 GTF2H4Q92759 462 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 IMP4Q96G21 291 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms