RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 GPAT2Q6NUI2 795 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 MOXD1Q6UVY6 613 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 OR5J2Q8NH18 312 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 GANCQ8TET4 914 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 MZB1Q8WU39 189 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 USP7Q93009 1102 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 SLC47A1Q96FL8 570 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 SORT1Q99523 831 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 SPNS1Q9H2V7 528 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 OPTCQ9UBM4 332 aa7.49□□□□□ -1.21
VTI1A-201ENST00000393077 ABT1Q9ULW3 272 aaKnown RBP7.49□□□□□ -1.21
VTI1A-201ENST00000393077 MARF1Q9Y4F3 1742 aaKnown RBP7.48□□□□□ -1.21
VTI1A-201ENST00000393077 TRAV19A0A0A6YYK7 116 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 hCG_1807616A0A1W2PRN6 198 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 SLC15A5A6NIM6 579 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 FABP7O15540 132 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 TSPAN8P19075 237 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 PRKACGP22612 351 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 GRIK4Q16099 956 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 CCNJQ5T5M9 372 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 MAP1SQ66K74 1059 aaPredicted RBP7.48□□□□□ -1.21
VTI1A-201ENST00000393077 DLK2Q6UY11 383 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 LIPIQ6XZB0 460 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 TMEM151BQ8IW70 566 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 ABI1Q8IZP0 508 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 GOT1L1Q8NHS2 421 aaPredicted RBP7.48□□□□□ -1.21
VTI1A-201ENST00000393077 GATAD2BQ8WXI9 593 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 MARVELD3Q96A59 401 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 EXOSC8Q96B26 276 aaKnown RBP7.48□□□□□ -1.21
VTI1A-201ENST00000393077 ZNF778Q96MU6 729 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 DCLRE1CQ96SD1 692 aaKnown RBP7.48□□□□□ -1.21
VTI1A-201ENST00000393077 AGAP2Q99490 1192 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 CRB3Q9BUF7 120 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.48□□□□□ -1.21
VTI1A-201ENST00000393077 FOLH1BQ9HBA9 442 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 SDHAF3Q9NRP4 125 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 ADARB2Q9NS39 739 aaKnown RBP7.48□□□□□ -1.21
VTI1A-201ENST00000393077 TAS2R3Q9NYW6 316 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 KIAA0513O60268 411 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 PTPRAP18433 802 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 UBA1P22314 1058 aaKnown RBP7.48□□□□□ -1.21
VTI1A-201ENST00000393077 TNFSF8P32971 234 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 RARRES1P49788 294 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 SCNN1GP51170 649 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 GRM3Q14832 879 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 BMT2Q1RMZ1 405 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 FBXO43Q4G163 708 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 TMEM65Q6PI78 240 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 C11orf88Q6PI97 169 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 TIFABQ6ZNK6 161 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 SV2AQ7L0J3 742 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 OTOP1Q7RTM1 612 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 TTC29Q8NA56 475 aaPredicted RBP7.48□□□□□ -1.21
VTI1A-201ENST00000393077 SLC22A17Q8WUG5 538 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 SMG7Q92540 1137 aaKnown RBP7.48□□□□□ -1.21
VTI1A-201ENST00000393077 TREX2Q9BQ50 279 aaPredicted RBP7.48□□□□□ -1.21
VTI1A-201ENST00000393077 CATSPERBQ9H7T0 1116 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 TMEM39AQ9NV64 488 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 SDHAF2Q9NX18 166 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 TAS2R7Q9NYW3 318 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 COL20A1Q9P218 1284 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 USP18Q9UMW8 372 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 CA5BQ9Y2D0 317 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 GSTK1Q9Y2Q3 226 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 C10orf71Q711Q0 1435 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 ASB14A6NK59 587 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 ISM1B1AKI9 464 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 TMEM233B4DJY2 109 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 E9PI62 339 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 SLC28A1O00337 649 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 PRMT5O14744 637 aaPredicted RBP7.48□□□□□ -1.21
VTI1A-201ENST00000393077 OIP5O43482 229 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 LTFP02788 710 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 ZDHHC11BP0C7U3 371 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 HGFP14210 728 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 PAMP19021 973 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 ATP5F1P24539 256 aaPredicted RBP7.48□□□□□ -1.21
VTI1A-201ENST00000393077 CSTF2P33240 577 aaKnown RBP eCLIP7.48□□□□□ -1.212e-7■■■■□ 24.5
VTI1A-201ENST00000393077 PTPN7P35236 360 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 PTGER2P43116 358 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 RAB13P51153 203 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 JAG1P78504 1218 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 CNTN2Q02246 1040 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 XKR3Q5GH77 459 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 HECTD3Q5T447 861 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 RNF149Q8NC42 400 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 IL31RAQ8NI17 732 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 FAM120BQ96EK7 910 aaKnown RBP7.48□□□□□ -1.21
VTI1A-201ENST00000393077 CPB2Q96IY4 423 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 MRPL4Q9BYD3 311 aaKnown RBP7.48□□□□□ -1.21
VTI1A-201ENST00000393077 POPDC2Q9HBU9 364 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 COX16Q9P0S2 106 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 SLC17A6Q9P2U8 582 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 AASSQ9UDR5 926 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 CACNG2Q9Y698 323 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 NUP98P52948 1817 aa7.48□□□□□ -1.21
VTI1A-201ENST00000393077 ITGB6P18564 788 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 POU3F3P20264 500 aaPredicted RBP7.47□□□□□ -1.21
VTI1A-201ENST00000393077 WARSP23381 471 aaKnown RBP7.47□□□□□ -1.21
VTI1A-201ENST00000393077 GABRB3P28472 473 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms