RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 OR13A1Q8NGR1 328 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 IRGQQ8WZA9 623 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 CD101Q93033 1021 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 MR1Q95460 341 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 ERO1AQ96HE7 468 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 JAKMIP1Q96N16 626 aaKnown RBP2.91□□□□□ -1.94
PTPRC-205ENST00000391970 INTS14Q96SY0 518 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 THUMPD3Q9BV44 507 aaKnown RBP2.91□□□□□ -1.94
PTPRC-205ENST00000391970 KATNB1Q9BVA0 655 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 TUBB2BQ9BVA1 445 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 ALDH8A1Q9H2A2 487 aaPredicted RBP2.91□□□□□ -1.94
PTPRC-205ENST00000391970 RETREG1Q9H6L5 497 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 CDH20Q9HBT6 801 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 GKN1Q9NS71 199 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 PTTG2Q9NZH5 202 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 TBC1D7Q9P0N9 293 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 POLLQ9UGP5 575 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 A0A1W2PPK0 400 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 HTR3EA5X5Y0 456 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 ENO4A6NNW6 628 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 PI4K2BG5E9Z4 385 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 SLC7A4O43246 635 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 BUB3O43684 328 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 PRKNO60260 465 aaPredicted RBP2.9□□□□□ -1.95
PTPRC-205ENST00000391970 GBAP04062 536 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 ZFYP08048 801 aaPredicted RBP2.9□□□□□ -1.95
PTPRC-205ENST00000391970 HSPA8P11142 646 aaKnown RBP2.9□□□□□ -1.95
PTPRC-205ENST00000391970 FGF5P12034 268 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 TCF4P15884 667 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 EPCAMP16422 314 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 AMD1P17707 334 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 MUTP22033 750 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 MARK3P27448 753 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 CTNNA1P35221 906 aaKnown RBP2.9□□□□□ -1.95
PTPRC-205ENST00000391970 KRT2P35908 639 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 PRKCIP41743 596 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 UBASH3AP57075 661 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 ERVFC1-1P60608 527 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 SCN1BQ07699 218 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 ZNF415Q09FC8 603 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 NPTX1Q15818 432 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 SPDYCQ5MJ68 293 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 FAM91A1Q658Y4 838 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 C11orf63Q6NUN7 778 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 CORO6Q6QEF8 472 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 MOXD1Q6UVY6 613 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 ANO5Q75V66 913 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 ZNF771Q7L3S4 317 aaPredicted RBP2.9□□□□□ -1.95
PTPRC-205ENST00000391970 NUDT13Q86X67 352 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 FOXP4Q8IVH2 680 aaPredicted RBP2.9□□□□□ -1.95
PTPRC-205ENST00000391970 TIGD4Q8IY51 512 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 FAM9BQ8IZU0 186 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 ANKRD13CQ8N6S4 541 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 BMPERQ8N8U9 685 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 MAB21L3Q8N8X9 362 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 THAP8Q8NA92 274 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 DMBX1Q8NFW5 382 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 OCC1Q8TAD7 63 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 OLIG1Q8TAK6 271 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 C9orf43Q8TAL5 461 aaPredicted RBP2.9□□□□□ -1.95
PTPRC-205ENST00000391970 GRHL3Q8TE85 626 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 CORO2AQ92828 525 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 ATP6V1E2Q96A05 226 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 SLC47A1Q96FL8 570 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 ST6GAL2Q96JF0 529 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 SPATA33Q96N06 139 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 RTP3Q9BQQ7 232 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 TRAF4Q9BUZ4 470 aaPredicted RBP2.9□□□□□ -1.95
PTPRC-205ENST00000391970 FN3KQ9H479 309 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 TFB2MQ9H5Q4 396 aaKnown RBP2.9□□□□□ -1.95
PTPRC-205ENST00000391970 ZNF556Q9HAH1 456 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 ZBTB20Q9HC78 741 aaPredicted RBP2.9□□□□□ -1.95
PTPRC-205ENST00000391970 SPHK1Q9NYA1 384 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 DNAJB9Q9UBS3 223 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 DAPK2Q9UIK4 370 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 RASAL2Q9UJF2 1139 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 SLC7A7Q9UM01 511 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 SNX7Q9UNH6 387 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 FAF1Q9UNN5 650 aaPredicted RBP2.9□□□□□ -1.95
PTPRC-205ENST00000391970 JRKLQ9Y4A0 524 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 SCRIBQ14160 1630 aa2.9□□□□□ -1.95
PTPRC-205ENST00000391970 A0A1W2PN81 502 aa2.89□□□□□ -1.95
PTPRC-205ENST00000391970 PLOD2O00469 737 aa2.89□□□□□ -1.95
PTPRC-205ENST00000391970 PSMD14O00487 310 aa2.89□□□□□ -1.95
PTPRC-205ENST00000391970 XPNPEP2O43895 674 aa2.89□□□□□ -1.95
PTPRC-205ENST00000391970 SLU7O95391 586 aaKnown RBP2.89□□□□□ -1.95
PTPRC-205ENST00000391970 NR3C1P04150 777 aa2.89□□□□□ -1.95
PTPRC-205ENST00000391970 F7P08709 466 aaPredicted RBP2.89□□□□□ -1.95
PTPRC-205ENST00000391970 FAM58BPP0C7Q3 252 aa2.89□□□□□ -1.95
PTPRC-205ENST00000391970 PLA2G4BP0C869 781 aa2.89□□□□□ -1.95
PTPRC-205ENST00000391970 TGFB3P10600 412 aa2.89□□□□□ -1.95
PTPRC-205ENST00000391970 SP100P23497 879 aaPredicted RBP2.89□□□□□ -1.95
PTPRC-205ENST00000391970 ACAT1P24752 427 aaKnown RBP2.89□□□□□ -1.95
PTPRC-205ENST00000391970 EPHA2P29317 976 aa2.89□□□□□ -1.95
PTPRC-205ENST00000391970 CHRNA7P36544 502 aa2.89□□□□□ -1.95
PTPRC-205ENST00000391970 MNDAP41218 407 aa2.89□□□□□ -1.95
PTPRC-205ENST00000391970 TNNT3P45378 269 aaPredicted RBP2.89□□□□□ -1.95
PTPRC-205ENST00000391970 CRKLP46109 303 aaKnown RBP2.89□□□□□ -1.95
PTPRC-205ENST00000391970 GAS1P54826 345 aa2.89□□□□□ -1.95
PTPRC-205ENST00000391970 CLDN15P56746 228 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms