RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 STMN1P16949 149 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 CKMT2P17540 419 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 CD22P20273 847 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 MPZP25189 248 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 TIA1P31483 386 aaKnown RBP eCLIP2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 HNF4AP41235 474 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 CASP3P42574 277 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 CDKN2AP42771 156 aaKnown RBP2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 RPL21P46778 160 aaKnown RBP2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 CDX1P47902 265 aaPredicted RBP2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 NR2C2P49116 596 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 BRWD1-AS2P59051 145 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 ST8SIA6P61647 398 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 ASIC1P78348 528 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 UBXN1Q04323 297 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 TEFQ10587 303 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 ILF2Q12905 390 aaKnown RBP2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 MFAP5Q13361 173 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 VEZF1Q14119 521 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 KIR2DS3Q14952 304 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 RRS1Q15050 365 aaKnown RBP2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 ZNF260Q3ZCT1 412 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 TCTE1Q5JU00 501 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 ELFN2Q5R3F8 820 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 LCE5AQ5TCM9 118 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 SLC27A1Q6PCB7 646 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 TUBA1AQ71U36 451 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 NUP54Q7Z3B4 507 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 NRARPQ7Z6K4 114 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 TMPRSS11BQ86T26 416 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 ZNF554Q86TJ5 538 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 AMIGO1Q86WK6 493 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 FOXP4Q8IVH2 680 aaPredicted RBP2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 ODF3L1Q8IXM7 274 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 CLYBLQ8N0X4 340 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 ARHGAP24Q8N264 748 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 CARNMT1Q8N4J0 409 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 CHCHD4Q8N4Q1 142 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 SPC24Q8NBT2 197 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 SMRP1Q8NCR6 262 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 ZFAND2BQ8WV99 257 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 HEXDCQ8WVB3 486 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 IRGQQ8WZA9 623 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 PROX1Q92786 737 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 TEKT1Q969V4 418 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 CCDC47Q96A33 483 aaKnown RBP2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 SCRN2Q96FV2 425 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 PGM2Q96G03 612 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 OXNAD1Q96HP4 312 aaPredicted RBP2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 ADGRG7Q96K78 797 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 ZNF48Q96MX3 618 aaPredicted RBP2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 TUBA1CQ9BQE3 449 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 ZNF350Q9GZX5 532 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 ARRDC1-AS1Q9H2J1 176 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 SNX25Q9H3E2 840 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 RETREG1Q9H6L5 497 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 GAREM1Q9H706 876 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 MINDY3Q9H8M7 445 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 DBNDD1Q9H9R9 158 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 EBF2Q9HAK2 575 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 APOBEC3GQ9HC16 384 aaKnown RBP2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 ZBTB20Q9HC78 741 aaPredicted RBP2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 TRPC7Q9HCX4 862 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 TUFT1Q9NNX1 390 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 KLHL1Q9NR64 748 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 OLFML3Q9NRN5 406 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 COMMD8Q9NX08 183 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 OSER1Q9NX31 292 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 RNF150Q9ULK6 438 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 KCNS2Q9ULS6 477 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 KCNK7Q9Y2U2 307 aa2.78□□□□□ -1.96
TRAJ40-201ENST00000390497 IL16Q14005 1332 aa2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 A0A1W2PN81 502 aa2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 C5orf60A6NFR6 353 aa2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 DUXAA6NLW8 204 aa2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 SMTNL1A8MU46 457 aa2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 E9PI62 339 aa2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 GAPDHSO14556 408 aaPredicted RBP2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 FCGR3BO75015 233 aa2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 RTN2O75298 545 aa2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 CRCPO75575 148 aa2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 RPS6KA5O75582 802 aa2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 BAG4O95429 457 aaKnown RBP2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 SMIM18P0DKX4 95 aa2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 EEF2P13639 858 aaKnown RBP2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 TCF4P15884 667 aa2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 EPORP19235 508 aa2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 ITIH1P19827 911 aa2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 TKTP29401 623 aaKnown RBP2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 PTGER4P35408 488 aa2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 ATP6V1E1P36543 226 aa2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 CHRNA7P36544 502 aa2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 MNDAP41218 407 aa2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 GMPSP49915 693 aaPredicted RBP2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 KHKP50053 298 aa2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 PDX1P52945 283 aa2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 UBASH3AP57075 661 aa2.77□□□□□ -1.97
TRAJ40-201ENST00000390497 DSCR9P59020 149 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms